Formica exsecta (narrow-headed ant): 115241830
Help
Entry
115241830 CDS
T07422
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex04512
ECM-receptor interaction
fex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115241830
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115241830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fex04147
]
115241830
00536 Glycosaminoglycan binding proteins [BR:
fex00536
]
115241830
Exosome [BR:
fex04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115241830
Glycosaminoglycan binding proteins [BR:
fex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115241830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115241830
NCBI-ProteinID:
XP_029673630
LinkDB
All DBs
Position
Unknown
AA seq
2021 aa
AA seq
DB search
MTRLGLRFIASAVCLAGIVSGQFNHTSGPQPVLPLERGDIEGPANSNDDEYDSSLGWKDL
NRFITDNEGSEDPRKRNSSITAGHYSPDERTRQWSYYRNRTNPYGQGYPSRYPYDRQSQG
GYDRYPDGGGASGLGNDENRPGGYPNGHGEGYYDTYSGAGESERGGGGGGGGSYNYGQRG
SSDPYSGSYGGNYDARGADAYGRESGGRGGGDAYGGGRGGGETYGGGRGGGETYGGGHGG
GDTYGGSRGGGDTYGGGREDGNTYSGSRGGGYGGYGGASLSTGDNENYPSNYHVVPMPGT
PSNCSGSGCCAPKCFAEKGSRGPPGLIGPQGPKGQRGFPGAEGLLGPKGEKGDPGPQGPH
GVKGDRGKIGMPGFPGINGVPGVQGPPGSPGFPGRDGCNGTDGAPGRDGVPGEPGPRGFR
GVSGPKGEKGQPAYAGAFPIGQKGEPGMDGVRGPPGPPGLQGDRGLSGPKGERGPYGTSG
IPGPKGEKGNMGLGFEGLKGDKGQKGDSGPPGSTAPIMPFSGGTSEVTGPPGEQGHKGDK
GESGPEGQRGEPGFIGDHGIPGGSGHKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGID
GLEGLSGRHGKKGEPGRDGPMGVPGLRGPPGPPGGGKGRPGPPGPKGPRGFPGPTGPRGA
DGFPGDPGPRGPLGLQGGPGLPGIPGPEGLPGEKGGKGEPGLTGFPGGPGPRGFDGPPGP
TGPRGPPGEKGLSIMGPKGMDGTPAFDGEKGQKGERGYAGVRGRPGDSLDGIPGAPGVPG
ETGEAGAPGRDGIPGLPGSTGEKGDIGGRCIDCLPGLRGEKGDRGTDGIPGLTGPRGPPG
ERGFPGEPGQDGLPGTIGSPGPPGKDGIPGAPGPQGESGTPATVTWNMLKLEKGDKGARG
EPGRQGPPGPEGPLGEKGRPGFEGFPGLKGTPGDRGFPGQDGVPGRPGTPGRKGEKGLSI
KGESGIPGRPGSVGQKGEPGLYGLKGEAGQCPPLRFMKGFKGDRGLTGDKGELGPPGKDG
LPGDKGLQGFPGASGVPGPIGAPGPVGARGLPGPRGDKGNMGPMGFPGEPGREGPRGFPG
APAPKGDKGESGISVKGSPGLTGPPGEKGEKGLPGPPGKEGLVGYPGLPGFAGDKGDIGA
PGINGLPGAPGEKGDTGPVGPPGPPGVAGLPGTDGSKGEPGLPGEPGRAGLPGFPGAKGD
RGELGIDGAKGYPGRRGLPGTPGRPGTDGELGIKGEHGDKGSPGFPGLPGMEGKPGRPGI
AGLKGDQGPVGTPGLPGLIGYEGPKGDTGFPGPPGRKGEPGQVSEKGQKGEPVMPEIRGP
QGPSGRDGIDGAKGEAGRPGIGHDGLPGLKGEQGTRGRDGLPGFQGQKGDTGVRGFPGIK
GDFGSPGTPGEPGSPGIDGLPGEVGDVGPPGVPGFPGLDGEIGSPGRPGLDGVKGDRGLI
GLVGLPGISGASGEKGDRGPPGPTIQIKGEKGEPGISGFPGSKGEKGDQGLVGIAGYDGE
KGDRGLPGSEGSSGPHGAPGPKGEQGPSGISGIPGVTIKGEKGLPGLMGKHGRDGLPGRP
GEKGEQGLPGLPGQKGDIGPYGPVGPQGEKGNPGPPGLTGSSGRDGAPGLEGVPGLPGER
GPKGDQGLPGLLSPPGERGEPGHPGPSGLDGPAGEKGERGWDGVNGLPGPPGEKGDRGYS
GAVGLMGAIGYVGQKGEKGEDCIEPPMGPKGDRGYPGSSGPPGPPGEKGLSGPHGFPGLD
GIKGEQGFIGPAGPAGLPGLPGPVGAPGLPGLQGPAGLPGLVGEPGAPCEATPDYLTGIL
LVKHSQSQTVPVCEPGHIKLWEGYSLLYTDGDERAHSQDLGYAGSCVRKFSTMPFLFCDV
NNVCHYASRNDRSYWLSTNSPIPMMPVEETAIRDYISRCVVCEVPANVIAVHSQSINIPE
CPTGWTTLWIGYSFIMHTGAGSQGGGQSLSSPGSCLEDFRATPFIECNGAKGHCHYYSNQ
YSFWMVTIEDGQQFRSPEKQTLKAGNLRTRISRCQVCIKNT
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcatcgcatccgcagtttgcctggccgggatagttagt
gggcaattcaatcacacatcagggccacaaccggtcctgccgctggaacgaggtgatatc
gaagggcctgcaaacagtaacgatgatgaatacgacagttcgttgggatggaaagattta
aacagatttattacggacaacgaaggatccgaggacccgagaaaacgaaacagcagtatc
acggctggtcattacagtcccgacgagaggactcgacaatggagttattataggaatagg
accaatccttacggtcaaggttatccgagccgatatccttacgatcgacaatcgcagggt
ggctatgacagatatcctgacggaggcggcgcgtcgggattaggaaatgacgaaaatcga
ccaggtggttatcctaacggtcatggcgaaggatactacgatacatacagcggtgccggt
gaaagtgaacgaggaggaggaggaggaggaggaggttcttacaattatggccaaagaggt
tccagtgatccttatagtggcagttatggggggaattatgatgcgagaggtgcggatgct
tatggtcgtgaaagcggcggtcgtggaggaggagatgcttatggtggcggtcgtggcggt
ggagaaacgtatggtggcggtcgtggcggtggagaaacgtatggtggcggtcatggaggt
ggagatacttatggcggcagtcgtgggggtggagatacttatggcggcggccgagaagac
ggaaatacttacagcggcagtcgcggaggcggttatggtggttacggtggtgccagtctc
tccaccggagacaacgaaaattatccaagcaattaccacgtggtaccaatgcctggaaca
cctagtaattgcagcggatcaggatgctgcgcacccaagtgtttcgccgaaaagggctca
cgggggcctcctggattaattggaccgcaaggtcctaaaggacaacgaggattcccagga
gcggaaggtcttctaggtcctaaaggtgaaaaaggagatcccggcccgcaaggtccgcat
ggtgtgaaaggtgacagaggaaaaatcggtatgcctggttttcccggtataaatggtgtg
cctggagtacaaggaccaccgggatctcctggtttccccggtcgtgatggatgtaacgga
acagacggtgctcccggacgtgacggtgttcccggagaaccgggacctcgtggttttcga
ggagtgtccggtcctaaaggagaaaagggtcaaccagcgtatgctggtgctttccccatc
ggacaaaaaggtgaacctggtatggacggtgtaagaggaccccccggtccacctggtttg
caaggagaccgaggcctatctggcccgaagggtgaacgaggcccttatggtacctccggc
ataccaggtccgaaaggagagaaaggtaacatgggtctcggattcgaaggattaaaggga
gataaaggtcaaaaaggagactcaggacctcccggttcgactgcgcctattatgccgttc
tcgggaggaacctcggaagtaactggtccgcccggagaacaagggcataaaggagataag
ggtgaatcgggaccggaagggcaaagaggagaaccaggattcataggtgatcacggtata
cccggaggatcaggtcacaaaggagagaagggtcttccgggagctccaggtattcgtggt
agagatggtttctctggacctcctggacctcctgggcgaaaaggtgatcgaggtattgat
ggattggaaggactttctggacgccacggcaaaaaaggagaacctggtcgagatggacca
atgggtgtcccaggattacgtggacctcctggaccaccgggaggtggtaaaggaagacca
ggaccaccgggaccaaaaggtccacgtggtttcccaggacctaccggaccgcgaggagca
gacggttttcccggagacccaggaccaagaggtcccttaggcttacaaggaggtcccgga
ttacccggaattccaggtccagaaggtttaccgggagagaaaggtgggaagggtgagcct
ggtttgactggatttcccggaggcccaggaccacgtggatttgacggaccaccgggacca
acaggaccgcgagggccgccaggagaaaaaggattgtcgataatggggccaaaaggaatg
gatggaacgcccgcttttgatggagaaaagggtcagaagggtgaacgaggttacgcgggt
gtccggggccgaccaggagattctctggatggtattccaggagctcccggtgtaccgggt
gagactggagaagcgggagcaccaggaagagacggtataccgggtcttcccggatcgaca
ggagaaaaaggagatattggcggtcgctgtatagattgtttaccgggattgcgaggtgag
aagggagatcgtggtacggatggtatcccgggtctcactggacctcgaggaccgcccgga
gaacgcggcttccctggagaacctggacaggacggattaccaggcacaatcggatctccg
ggaccaccaggaaaggatggtatacccggtgctccaggacctcaaggagagtctggaact
ccagcgacagtgacatggaatatgcttaagctagaaaaaggtgataaaggagcgcgcggc
gagcctggtcgacagggcccgccaggaccagaaggacctctgggagagaagggaagaccc
ggatttgaaggattcccaggacttaaaggcactccaggagatcgcggattccctggacag
gatggcgttccaggaagaccaggtacgcctggacgcaaaggagagaaaggattaagcata
aagggtgaatcaggaataccaggtagaccaggatctgtaggacaaaaaggagaacctggc
ctatatggtcttaagggtgaagctggtcaatgtccgccacttaggtttatgaaaggtttc
aaaggcgatcgaggtttaactggagacaagggagaacttggaccacctggtaaagatgga
ttgcctggtgataaaggcttgcaaggttttccgggtgcatctggtgtacccggtccaatc
ggtgctcctggacctgtaggtgcgagaggtttacctggcccacgtggtgataaaggcaac
atgggacctatgggattcccaggagaacctggtcgggaaggacctagaggtttcccgggt
gctccggctccgaaaggggacaaaggagagtctggaatatccgtcaagggcagtcctggt
ttaacaggtcctccgggtgaaaagggagagaagggtcttccaggaccacccggaaaagaa
ggtctagtaggttatccgggattaccaggctttgctggcgacaaaggagacatcggtgca
ccgggaataaatggtttaccgggagcacccggtgaaaaaggagatactggtccagttggt
ccacctggtcctccaggtgtcgctggtcttccaggaaccgatggaagcaaaggcgagcca
ggattaccgggagagcctggtagagcgggtcttccaggattcccaggcgcgaaaggtgat
cgcggtgaactaggtattgatggagcaaaaggatatccaggcagacgaggtttgcctgga
actccaggtagacctggcacggatggtgaattgggtataaagggagaacacggtgataaa
ggttcgccaggattccctggattaccgggtatggaaggaaagcctggtcgccctggtata
gccggcctgaaaggagatcaaggaccagtcggtacgcctggtttaccgggactaatcggt
tacgaaggacctaagggcgacactggattcccaggaccaccgggaagaaaaggagaacca
ggacaagtttcggaaaaaggacagaaaggtgagccagtaatgcctgaaatacgaggtcct
caaggcccttcaggacgagacggtattgacggagcaaagggagaagctggcagaccaggt
attggtcatgatggattgcctggattaaaaggcgaacaaggcacacgtggtcgggatgga
ttgccaggatttcaaggtcaaaaaggtgacactggcgtacgaggattccctggaataaaa
ggcgattttggctcaccgggtacacccggagaaccaggttcgcccgggatagatggactt
cctggagaagttggcgacgttggaccaccgggagtacctggttttcctgggcttgatggc
gaaataggttctcccggtcggcctggacttgatggcgttaaaggagatcgcggtttaata
ggacttgttggattgcctggtatttctggagcatctggagaaaagggagaccgcggtcct
cccggaccaacaatccaaattaagggtgagaaaggtgagccaggtatatctggatttcct
ggatcaaaaggagagaaaggagatcaaggactagtaggtatagctggttatgacggtgaa
aaaggtgacagaggtttacctggatcagaaggatcttctgggcctcatggtgcccctgga
cctaagggtgaacaaggaccttccggaatttctggcatccctggagttacgataaagggt
gagaaaggtctgccaggtttgatgggtaagcacggtagagatggattgccaggtcgaccc
ggagaaaagggtgagcaaggattgcctggtttgcctggacagaagggagatattggtcct
tacggacccgttggaccacaaggtgaaaaaggtaatccaggtccaccaggtctgactggg
tcatcaggacgcgacggagctcctggtcttgaaggtgtaccagggttacctggtgaaaga
ggtccaaagggtgatcaaggactgcctggattacttagccccccaggagaaagaggagaa
cctggtcatccaggaccaagtggattggatggacctgcaggagaaaagggtgaaagaggt
tgggacggtgttaatggtctacctggaccgcctggcgagaagggtgatagaggatattct
ggtgcagtcggattgatgggtgccattggttatgtaggtcaaaaaggtgaaaagggtgag
gactgtatcgagccgccgatgggacctaaaggagatcgcgggtatcctggatcatccgga
ccgcctggtcccccgggagagaaaggactttcgggtccacacggtttccccggcttggat
ggtatcaaaggcgagcaaggtttcatcggtccagcaggacctgcgggactgccaggatta
cctggaccagttggtgcgcccggtctaccgggtcttcaaggtccggccggtttgcctgga
cttgtcggagagcctggtgcaccgtgcgaagcgacacctgactatctcaccggtatcctt
ctggtcaagcacagtcaaagtcaaaccgtgccggtttgtgagccaggtcacatcaagctc
tgggaaggatacagtttactctacactgatggagatgaaagggcgcattctcaagattta
ggttacgccggctcgtgtgtcagaaaattctcgacgatgcccttcctgttctgcgacgtc
aacaacgtctgccattatgctagtcgcaatgatcgttcttattggctatcgaccaatagt
ccaattcccatgatgcccgtcgaggaaacggcgataagagattatatttccaggtgcgtg
gtgtgcgaagttccggctaatgtgatagcggtacacagtcaatcgataaacattccagaa
tgtccgactggatggaccactctttggatcggttatagtttcataatgcacaccggcgcc
ggttcccagggtggcggccagtccctgtcgagccccggatcctgcctggaggatttccgc
gccacaccgttcatcgaatgtaacggcgctaaaggacactgccattactattctaatcag
tacagcttctggatggttactatagaggacggccagcagttcaggagccccgagaagcag
actctaaaggcgggcaatcttaggacccgaataagtcgctgccaagtttgtataaagaac
acgtaa
DBGET
integrated database retrieval system