Formica exsecta (narrow-headed ant): 115242000
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Entry
115242000 CDS
T07422
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03013
Nucleocytoplasmic transport
fex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115242000
03015 mRNA surveillance pathway
115242000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115242000
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115242000
mRNA cycle factors
P-body specific factors
115242000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
115242000
NCBI-ProteinID:
XP_029673857
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MSENTSEAATAEKEATSEEDAVSEEDRQYLAEYVRETEQRLATKEEIRASNLNPTRPLDT
SFSKLDSSLKRNTTFVKKLKNFSMTQLDTVLKDMANLNLTKYVSEVATALVDAKLKMTDV
APAIRVCSFLHQTYAEFSTHFFENWQRILSLKINDKISNPSKLRVDLRFYAELVNAGIFT
HKQGLSLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKKVRELSEKLNVPIP
KSKLLSPDKQQNVKLLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELSLERKEKL
EALQVSYERLLTSVQSFSDTLDEPMLELPVDNEMKTESEETLKMINEGEDNTILEDMWGD
EETRRFYEVLPDLTVFLPGSYLKETPKEASKTDVSITEDALDEEIVFDELEEAEKIEEPP
EPEVEEPQVSNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALFG
VSRIRQDLLPFYSRLAAILHPVMPEIGNDLCQMLKQDFKYHVHKKDQINIESKIKVVRYI
GELVKFKLYSKIEALYCLKVLLHDFTHHHIEMVCNLLEICGRYLFCSPDSHQRTKVYLEQ
MMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVAKKDRPPVHEFIRKLLYQDLSKTNTD
KVLKWMRKLDWEDENISTYAVKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDGV
LEDIRLCMEINLPKYNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSVDHSSPS
ILDPSDHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQNYFWFKYTDPVWTPENPF
PVGIDYMYRDTLTMLRPKMQLFQNYKEAQCAIEELRNSLYPSLGNPPVDDIPAEGENDMS
VIMEGDEEATAIGNGSGDAKGMAELHFEESEDCSEAQSEEEWTADAERDDAMGTQENTQG
DRSQSLSAEGGTEGVIMDVTEELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMRD
SVKPQQVDISVPLHVKSTKKTYEQLQERPTDNNTVDFVLMLRKGNKQQYKNLAVPVSSEL
AMNLRNREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNHP
KGAPDADLIFGPKKIR
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacacaagcgaagcagcaacagccgaaaaagaagctactagtgaagaagat
gctgtctcggaagaggatagacaatacttggcagagtatgtgcgggaaacagaacaaaga
cttgcaacaaaggaagagattcgcgcatctaatctaaatcctacaagacctttggataca
tcattcagtaaacttgactcgagtcttaagagaaacaccacatttgtcaagaaattgaag
aactttagcatgactcaactcgatactgttttaaaagacatggcaaatttaaacttgacc
aaatatgtgagcgaggttgctaccgctttagtggatgccaaattaaagatgaccgacgtt
gcaccagccattagagtatgcagttttcttcatcagacatatgctgagttttccactcat
tttttcgaaaactggcaaaggatattgtcattaaagattaatgataaaatctcgaatccc
agcaagttgagggtagatcttcgattctatgcagaactggtaaatgctgggatattcaca
cacaagcagggtttgtcactgctaggctcagtactgacagtgttgatcaatatggataag
gaggagcataataatgccagcataatattgagcttctgccgacactgtggtgaggattat
gctggtcttgtaccaaagaaggtacgagaactatccgagaaactaaatgttccgattcca
aagagcaaacttttgtcgccagacaagcaacagaacgttaaattgttactacgggactat
tacaactctttatgcaagcatttgttgaaggaacacaaggaattgcaggcgtttgaaaag
cagaatcgcaaaatattgcagactagaggtgaactgagtttagagagaaaggaaaaatta
gaggctctccaagtctcttatgaacgtttgttaactagtgtacagagcttttctgatacg
ctggatgagccgatgctcgaacttccggtggacaatgagatgaagaccgaatcagaagaa
acgttaaagatgattaatgagggagaagataatactatcttggaagatatgtggggtgat
gaggaaacgagacgtttctatgaagtattaccagacttgacggtttttctgccaggttcg
tatttgaaggagacgccgaaagaagcatcaaagacagatgtatcgataacggaggatgct
cttgacgaagagatagtctttgatgagttagaggaagctgagaaaatcgaggagccaccg
gaaccagaagtggaggaaccgcaagtgtccaatacgagcaataagatattattagatgct
ttcttgacgcatctgccgaactgcgtcaatcgggagatgatcgacaacgctgctgtgaac
tttctgatgaaccttaacacgaaacacaacaagaaaaaactagtaaaggctctttttggt
gtttctaggattcgtcaagatctgctacccttctactctcgcttggcagccattctccat
ccggtaatgccagaaatcggcaacgatctatgccaaatgctaaagcaagatttcaagtac
cacgtccataagaaggatcagatcaacatcgagtcgaagatcaaggtggtccgctacatt
ggcgagctcgtcaaatttaagctctattcgaagatagaagcactctactgcttgaaggta
ttgttgcacgattttacgcatcatcacatcgagatggtctgcaatctgttggagatctgc
ggtcgatatctcttctgctcgccggactctcatcagagaaccaaagtctacctggaacag
atgatgcgtaaaaaagcagttactgcacttgactcacgctatgtcacgattatcgaaaat
gcatattatttcgtgaatccacccgagtcgactggcggcgtcgcaaagaaagatagaccg
cctgtgcacgaattcatcaggaaattgctatatcaggatttatccaagacgaatacggat
aaggtgctcaaatggatgcgtaaacttgactgggaagatgagaacatatcgacatatgcc
gtaaaatgcctgactgccgcttacaatgttaagtatcccaatattcgttgcgtgggcagt
ttgttggccggcttagtggcccattatgagaccatagggcctcaggtagtcgatggtgta
cttgaggatatacgactgtgtatggaaataaacttgcctaaatataaccaacgacgcatt
gctatggtcaaatacttgggcgaactgtacaattaccgaatggtagaaagtggcgacatt
ttccgtactttatatttactgatcacctttggcgtcagcgtggaccactcgtcaccgagc
atacttgatccatccgatcatctgtttcgcattcgtttggtatgtacgttattagagact
tgtggccaatatttcagcggtggctccagcaagaagaagcttgattattttctggtattt
ttccaaaattacttctggttcaagtatacagatcccgtctggacgcccgaaaatccattc
cccgtcgggatagactacatgtatcgcgatacattaacgatgctacggcccaaaatgcaa
ttgttccaaaattataaagaggcgcaatgtgccatagaagaattgcgaaactctttatac
ccaagtttgggtaatcctcccgttgatgacatccctgcggaaggcgagaatgacatgagc
gttatcatggaaggtgatgaagaagcaacagcgatcggaaacggtagcggggacgcgaaa
ggtatggccgagctgcactttgaagagtccgaggattgttcggaggcgcagtcggaagag
gaatggacggctgacgcggagcgggacgatgctatgggcacccaagagaacactcagggt
gatcggtctcagagtctgtcggcagagggtggtaccgaaggcgtaattatggacgtgacg
gaagaactgaatgcagctttgccagctggaccgcgacgcgtgagttgtccggaggacgat
gactttctgtccgcgctggataaaatggtatcggataatatacaagatagaatgcgagat
tcggtaaaaccgcaacaggtcgatatctctgtgccgttgcatgtaaagagcacaaagaaa
acatacgagcagctacaggaaagaccaactgacaacaacacagtggattttgtgctaatg
ttgagaaagggtaataagcaacaatacaagaatctggcggttccagtatcatcagagttg
gccatgaatcttaggaatcgcgaacaagaacagaaagaagagaaggagcgcgtgaaaaga
ctgaccttgaacattaccgagagacaagaggaggaagactaccaggagactatgaatcaa
agcaccagaccggtcaccgtgaacctgaatagagaacgacgacaaaagtataatcatcct
aaaggagcccccgatgccgatctaattttcggaccgaagaaaattcgataa
DBGET
integrated database retrieval system
