Formica exsecta (narrow-headed ant): 115242052
Help
Entry
115242052 CDS
T07422
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115242052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115242052
03012 Translation factors [BR:
fex03012
]
115242052
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115242052
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115242052
Translation factors [BR:
fex03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115242052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
AAA_22
ResIII
NPHP3_N
AAA_14
NACHT
ATPase
AAA_19
PhoH
NB-ARC
ABC_tran
AAA_16
ATPase_2
Motif
Other DBs
NCBI-GeneID:
115242052
NCBI-ProteinID:
XP_029673924
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MSRRFFPNGMSNSSAQHNREEQQMQSSASGSGGPYSRTRRLSPEFKVFRLLPHLEQRIKT
ILNNSKSFCSSIFDERSNFEYDDKYHHIHDPRFKKKFLEILNGDIEHNLTKAISMKSKLQ
RNSNVDRILLNEYKDKQDQNDYLNMLKFRLKLPAYHKKSEILQLIKDNQVVVISGETGCG
KTTQVAQFILDDQLEAGNGSITRIVCTQPRRISAISIAERVAAERAERLGKSVGYQIRLE
KIPTREQGSILFCTTGILLQIMKTDPALKDFSHVILDEIHERTTESDFIITLLKKIIPKR
TDLKILLMSATLNSERFSKYYNECPMIHIPGFTYPVQEFYLEDVLSLTQFKFSEEEPTDY
SKYLKDTRYKKQQHKKREFLKIMQPYIEQLRTEMKYGEHVFNQLRNPNSENFSLELIEKL
VRYICNTKGPGAILIFLPGMMDISQLNRMMLDSEYYPSDKYIIYPLHSRMPTINQKLIFK
KPPDDIRKIIIATSIAETSITIEDVVYVIDCGKTKLGGFDVKNNIQTLEPEWVSLATAKQ
RRGRAGRVKSGECYHLYYKVREMAFDQYPLPEMLRTRLEEVILKIKILQLGKAKEFLASV
MDPPDLKAIDLSLDLLRTLNALDKEEHLTPLGYHLAHLPLDPRTGKMILWAALFSCVKPI
FAIAASLTFKDAFYCPLEKEEKEKAHQKKLELSMGENSDHIAFAEALRRFEVARLRGNAG
AFCKEYFLSFNTLKLLSEMKTQFAQYLYEMKFLNNNNPDDKNANRNSHNIALIKAIVCAG
LYPNIAVISDITKNETIVGWTPEDGDVRMHPSSVNWKASNFASQYLTYFTKQRSSAIYLH
DTTCISVPILLFTGPNISIRREKGKCVISNHNFSAYITCKPQTAEMIQELQRALNSLLTY
KMTHPATVLWSTFEGQMLNTIIGLISQKD
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgccgattctttcccaatggaatgtcaaattcctctgcacaacacaatagagaa
gaacaacaaatgcagtcatctgcatctggatctggaggaccttactcacgaacacgaaga
ctttcccctgaatttaaagttttcagattattacctcatctagaacaaagaattaaaact
atcttaaataattctaagagcttttgcagttcaatttttgacgaaaggtctaactttgaa
tatgacgacaagtatcatcatattcatgatccccgatttaaaaaaaagtttttagaaatt
ttaaatggtgatatagagcacaatcttaccaaagctataagtatgaaatcaaaattgcag
agaaatagtaatgttgacagaatattactaaatgaatataaagataagcaagatcaaaat
gattatctaaatatgttaaaatttcgattaaagttaccagcgtatcataaaaaatcagaa
atattacaattgattaaagataaccaagttgttgtcattagtggagaaactggatgtggc
aaaaccacacaggtagctcaatttatattggatgatcagttagaagctggaaacggtagt
attactcgaatagtttgcacgcagcctaggaggatttcagctatttccattgctgaacgt
gtagctgcggaaagagcggaaaggcttgggaaatccgtgggctatcagatacgactcgaa
aaaattccaacgcgggagcaaggaagtatattgttttgcacaactggtatattactacag
attatgaagactgatccagcattaaaagacttttctcacgtgatattagatgaaattcat
gaacgtaccacggaaagtgatttcattattacattattaaaaaaaattattccaaaaaga
acagatttaaaaattctcttgatgagtgcaacattaaattctgaacgtttttcgaaatat
tataacgaatgtccaatgatacatataccaggattcacctatccagttcaagaattttat
ttagaggatgttttgtcacttacgcaattcaaattctccgaagaagaacctacagattac
agcaaatatctaaaagatacaagatacaaaaagcaacaacataagaaaagggaattttta
aaaataatgcaaccttacattgaacaacttagaactgagatgaaatatggagaacatgtt
tttaatcaattacggaatccaaatagtgaaaatttttcattggaacttatagaaaagtta
gttagatatatctgtaatacaaaaggtcctggagctattcttatttttctacctggcatg
atggatatatcacaattaaatagaatgatgttagattctgaatattatccatccgacaaa
tacatcatctatccgctccattcacgcatgccgacgattaatcagaaacttatatttaaa
aaaccgcctgatgatattcgtaaaataattattgcaacttccattgcggagacatcaata
actatagaagatgtagtgtatgtaatagattgtggaaaaacaaagcttggaggattcgat
gtaaaaaataacattcagactttagagcctgaatgggtatctttagctactgccaaacaa
agacgcggtagagccggcagagttaaaagtggggaatgttatcacttgtattacaaagtt
cgagaaatggcgtttgatcaatatccattgccagagatgttgagaacgcgcttagaagag
gtgatcttgaaaataaaaatcctgcaattaggaaaagccaaagagttcctagctagcgtc
atggatccgccagatttaaaagccatcgatctgtctctggatttacttagaacacttaat
gctttagacaaagaagagcatttgactcctttgggctatcatttggcacacctgccgctt
gatcctagaacaggaaaaatgattctctgggcggcactgttttcttgcgttaaaccaata
tttgctattgctgctagtctcacttttaaagatgctttctattgtcctctggagaaagag
gaaaaagaaaaagctcatcaaaaaaagttagaactcagtatgggagagaatagtgatcat
attgctttcgcggaagctctaagaagattcgaagttgcacgcctaagaggaaatgctgga
gcattttgcaaagaatactttctctctttcaacacattgaaacttctctccgaaatgaaa
actcaatttgcacagtatttatacgagatgaaatttctgaataacaataatccggacgat
aaaaacgctaacagaaattcacataacatagcattgataaaagccattgtttgtgcggga
ttatatcctaacattgctgttataagtgatattactaaaaatgaaactattgttggctgg
acaccagaagatggagatgtacgtatgcatccgtcgagtgtaaattggaaagcttccaat
tttgctagtcaatatttaacatattttacaaagcaacgttccagcgctatatatttacat
gatactacttgtataagtgttccaattttattatttactggaccaaatatatcgataaga
cgagaaaaaggaaaatgtgtaattagtaatcataatttttctgcatatattacttgcaaa
ccacaaactgcggaaatgatacaggaacttcaacgcgctctgaattctttattaacatat
aagatgacacatccagcaacagtactttggtcaacatttgaaggacaaatgttaaatacg
atcattggattaatatcccaaaaggattaa
DBGET
integrated database retrieval system
