Formica exsecta (narrow-headed ant): 115242157
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Entry
115242157 CDS
T07422
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
fex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115242157
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115242157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115242157
04121 Ubiquitin system [BR:
fex04121
]
115242157
03400 DNA repair and recombination proteins [BR:
fex03400
]
115242157
Enzymes [BR:
fex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115242157
Spliceosome [BR:
fex03041
]
Complex B
Other components
Prp19 complex
115242157
Complex C
Prp19-CDC5 complex
115242157
Ubiquitin system [BR:
fex04121
]
Ubiquitin ligases (E3)
U-box type E3
115242157
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
115242157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
U-box
B-prop_COPA_B_2nd
Beta-prop_SPT8
Beta-prop_Nup120_160
PAS_11
WD40_like
RMC1_N
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
115242157
NCBI-ProteinID:
XP_029674104
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MALSCAISNEVPEHPVVSPVSGTIFEKRLVEKYVTENGVDPINGKELTIEQLIDIKTTPI
VKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVQAATIPQPAVAVEAGGTATQPMEQAGITEDVIQKLQERA
TVLTQERKRRGRSVPEDLMPQDSIRSFQTLASHPGLHSASVPGILALDIHGADTSKILTG
GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDVVMTASPDTTIRVWNVGTSQTTL
LLKAHXGDYLLSSSLDQHWAFSDIRTGRLLTKVAGQTGQPLTTAQFHPDGLIFGTGTADS
QVKIWDLKEQSNVANFPGHTGPITAISFSENGYYLATAAEDSCVKLWDLRKLKNFKTLQL
EESYEVKDICFDQSGTYLAVAGTDVRIYLCKQWQELKVLNDHTAAATGVRFGKHAQYIAS
TSMDRTLKLYGLS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcttgtgctatttctaacgaagtgccagagcacccagtagtatcccctgtt
tctggaacgatatttgagaaacgtcttgttgagaaatatgtgactgagaatggagtggat
cctatcaatggcaaagaacttactattgaacagctcattgatattaaaacaactccaatt
gtaaagcctaaaccacctagcgcaacttccattccagcgatattaaaaatcctgcaagat
gaatgggatgctgttatgttacattcatttacattgcgacaacaacttcagactgcgaga
caagaattgtcccatgcattgtaccagcatgatgcagcttgtcgtgtcattgctagattg
acaaaagaagttactgctgctagagaagctctggccactcttaagccacaggctggaatt
gttcaggctgctacaataccacaacctgctgtggcagtagaagctggtggcacagcaact
caaccaatggaacaagctggtatcaccgaggatgtgattcagaaactgcaggaacgagcg
accgttctcactcaggagcgaaaacgacgtggacgctcagtgccagaggatctgatgcct
caggatagtattcgatcattccagaccctcgcgtctcatcctggactgcattctgccagt
gtacctggaatcttggcgcttgatattcatggcgcggacactagcaagattctgacgggt
ggcgctgacaagaatgctactgttttcaacaaggacactgaacaagtggtggcaattctc
aaaggtcacacgaagaaagttacacgagttatttatcatccagaggaagacgtagtaatg
accgcgtcacctgatactacgattcgtgtatggaacgttggtactagtcagacgacctta
ttactgaaggctcacnncggtgattatctattaagctcgtctctagatcagcattgggcc
ttctcggacatacgcaccggcagattattgactaaagtggcaggacaaacaggacaaccg
ttaactacggcgcaatttcatcctgacggtctaattttcggtactggcacagcagattct
caggtgaaaatctgggacttgaaagagcaatctaacgttgcaaatttcccgggtcacacc
ggcccaatcacagcgattagtttctccgagaatggatattacttggcgaccgccgcggag
gattcgtgcgttaaactctgggatttgcgcaagctaaagaactttaagacgctgcagtta
gaggaatcttacgaggtgaaggacatttgcttcgatcaaagcggaacttatctggctgta
gcaggaacagacgtgaggatatatctctgtaagcagtggcaggaattgaaagttctgaac
gatcacactgcagcggctactggtgttcgtttcggaaaacacgcgcaatatattgcatcc
actagcatggacagaactttgaagctctatgggttgtcataa
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integrated database retrieval system
