Formica exsecta (narrow-headed ant): 115242420
Help
Entry
115242420 CDS
T07422
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115242420
04121 Ubiquitin system [BR:
fex04121
]
115242420
Enzymes [BR:
fex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115242420
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115242420
Ubiquitin system [BR:
fex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115242420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
DUF5128
Beta-prop_IFT122_1st
zf-B_box
Motif
Other DBs
NCBI-GeneID:
115242420
NCBI-ProteinID:
XP_029674540
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MLAARQFDYFAEEHSYERKTRFFNSAARDTPLEFYQQFLPATMNQFKSPRNRVDYNRYFM
QMTNKSRKQEDQHFTPKRLNNAKKARAFSSPSPEKFLKHFSPKKLLQQHPSDNLLGHSIL
DETDSPFLYQSPRLYNQNTMIVGSLGSTGGDSRPGSSDDSLANRSPVRQLDTSSPDDFGY
FRMFEDASIPDVSGLNFSSANRSEKCQTNCEPFEDLNMNFLKIDLLDVNDNYSARQSLEQ
LICNSNAQKNMPNVPLIPLITKELEITKDMGQEVYSEQKSPVSEQRTHSPNMQIDVPLIP
KELEIANETEKDDYIGTLRSLVSDECSPSIQKDVPSAPLMAKELEITQEKEISAEVEKNQ
SLDCSSKETSPYHCNEHPYTQLLYCQTCCRPICKNCTSNCTCKHMTIDLVEFIETAQRQA
EEVLIEAYLGIDVLADDMENMGLDMAALDQRTKEALTDVKFFSRRMWSAVEEREKKLFKQ
IVEARRWKFEVLHERYMHLKEDKIRLSQAISALKYAIYDARFPNLVCNPGDLLKKKDMVL
AEIWQIRQSRKMKTRCTRDENWISFKSSDSNVLAVIANGGNVLVNSPGTIGDRLPPNRDY
KLSQSYFPYGLNEQMMQPIPRGRPISNYERNIVLPNRKPELQIKSTDVRIIGHFGENNPE
NLCRPWGLTCDNEGNIIISDRSNNRIQIYRDNGTLVRKFGSYGNGPCQFNRPAGIAVDSR
RRLIVVDKDNHRIQILTMEGEFLRSFGEHGEKQGQFCYPWDVAVNTACEIAVTDTRNHRV
QLFSAEGIPLRMFGGQPHLLRYLDSPRGICFNQEGKLIVTDFNNHHLLIIEHNMTDMRIL
KCEKELKGKKQDGSGENGDGQTEENAPAFQRPQGVIVADDGSILVADSRHNSIKAFNSVG
SLIYSYKPGQEEMDRPLGIALHWDGRMAFTDYGRNYVRLVRLEHHVDPVSRNAIMFG
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctgcacgtcagttcgactacttcgcggaagagcattcgtacgaaaggaaaaca
agatttttcaatagtgcggcacgggacactcccttggagttttatcagcaatttttgccc
gccaccatgaatcaatttaaatctccccgtaatagggtagattataaccgctatttcatg
caaatgacaaataagtctcggaagcaagaagaccaacactttacgccaaaaagacttaat
aatgcaaaaaaagctcgagcattttcaagtcccagcccggagaagttcctgaagcacttt
tccccaaagaaacttttacaacagcatccaagtgacaatttattaggccattcaattctc
gatgaaacagattccccgtttctatatcaatctccaaggctatacaatcaaaacactatg
attgtcggttcactgggctctacaggtggtgatagtcgaccaggttcttcggatgacagt
ctagcaaatcgttcgccggttcgccagttggataccagttcaccagacgatttcggatat
tttcgaatgtttgaagatgctagtataccagatgtctccggtctgaatttttcgagcgcc
aatcgaagcgagaaatgccaaacgaattgcgagccgttcgaagacctcaacatgaatttt
ctcaagatcgatttgctggacgtgaacgacaactattctgcacgacaatcgctcgagcag
ctaatctgtaactcgaatgcccagaaaaatatgcctaacgtaccgctgataccattgata
acgaaagagttagaaataacgaaagatatgggacaagaggtctactccgaacaaaaatca
cctgtttccgagcaacgaacccatagtccgaatatgcagattgatgtaccgttgatacca
aaggaacttgagattgcgaatgagacagagaaggatgattatatcggaactctacgatca
cttgtgtccgatgaatgtagtccaagtattcagaaagatgtgcctagcgcaccgttaatg
gcgaaggagctagaaataacacaggaaaaagagatatcggcagaggtagagaagaatcaa
tcgcttgactgttcatcaaaagagacttcgccgtaccattgcaatgaacatccatacact
cagctgctttactgtcaaacctgctgcaggccaatttgcaaaaactgcacctctaattgc
acctgcaaacacatgacgatcgatctcgtagagttcatcgagaccgctcagcgtcaagct
gaagaagtactgatcgaagcctatctcgggatagatgttctcgcggatgacatggaaaat
atggggttggacatggcagcgttagatcagagaaccaaggaagcactcactgacgtgaag
ttcttctcacgtagaatgtggtctgctgtggaagagagagaaaagaaattatttaaacaa
attgtggaagcgcgacgatggaaattcgaggttcttcacgaaagatacatgcatctgaaa
gaggataaaatccgattgtcacaggccataagcgctctcaaatacgctatctacgatgca
cgatttcccaatctcgtgtgtaaccccggcgatctcttgaagaagaaagacatggtgtta
gctgagatttggcagattcgtcagagtcggaagatgaagaccaggtgcacccgagatgag
aattggatatcattcaagagttccgatagcaatgtactggccgttatcgccaacggcgga
aacgttttggtgaacagtccaggcacgatcggggatcgtctaccgccgaatcgcgattac
aaattatcacagtcatattttccgtacggattgaatgagcaaatgatgcagccgataccg
cgcggtcgtccgatatcgaattacgagcgcaacatcgttcttccgaataggaaacccgaa
ttgcagatcaagagcacggatgtccggatcatcggccactttggcgagaacaaccccgag
aatctctgccgtccatggggattaacctgcgacaacgagggcaacatcataatcagcgat
agatccaataatcgcatacagatttatcgcgataacggcacgctcgtcaggaaatttgga
agctacggtaatggcccttgccaattcaatcgcccggccggaatcgccgttgactccaga
cgtcgtctcatcgtggtcgacaaggataaccatcgcatccagatcttaacgatggaaggt
gagttcttgaggtcttttggcgagcatggcgagaaacaaggccagttttgttacccgtgg
gacgtggcggtaaataccgcttgcgaaatcgcggtcacagacactaggaatcaccgcgtc
caattgttcagcgccgagggtattccgctgcgtatgtttggtggccaaccgcacttgctc
aggtatctggactcgccgcgcggcatctgcttcaatcaggagggcaagctcatcgtcacg
gatttcaacaatcatcatctattaataattgagcataatatgacggatatgcgtatactc
aagtgcgagaaagagttaaagggcaagaagcaagacggcagcggggaaaacggtgacggg
caaaccgaggaaaacgcacctgcgtttcagaggccacagggcgtaatagtggccgacgat
ggcagtatcctcgtcgcggactcccgccataattcgatcaaggcgtttaattcggtcgga
tcgttaatctattcgtataagccgggtcaagaagaaatggatcgtccactcggtatagcc
ctccactgggatggtagaatggcgttcacggattacggacgtaattacgtgcgcttggta
aggctggaacatcatgtggacccggtgtcgaggaatgctattatgttcggttga
DBGET
integrated database retrieval system
