Formica exsecta (narrow-headed ant): 115242639
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Entry
115242639 CDS
T07422
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115242639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115242639
Spliceosome [BR:
fex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115242639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
WD40_like
Beta-prop_NWD2_C
Nbas_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
115242639
NCBI-ProteinID:
XP_029674937
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MSDDEDLIYVKKQKTVHYGSLEEAERARLAALQVAVETTDEEKDITNANDIINASNLVGN
VHISNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEG
PADRRTRLRELLASVGEDAIKKKHEEEEKPLHTVEKDTETTWYHEGPESLRIARSWIATY
SLPRAKARLNEARQDLELPTATRTAKRQELLKKLQALSIYCSQLGDTRPISFCQFSPNSK
ILATASWSGLCKLWSVPDCTLLRTLKGHTCNVGCIVFHPKATITEDVIGDNAGQTCTLAS
CASDGTVKLWGGGNGEEPLAEVEGHEPHRVSRIAFHPSGRFLGTCCYDASWRLWDLEQQA
EVLHQEGHSRAVHCISFQCDGSVCATGSHDSFGRVWDLRTGRCIMFMEGHLTSIYGVDFS
PNGFHIATASEDNTCKIWDLRKRTCIYTIPAHTSLLSDVKYQRIEGQYLVTASYDNTAKI
WSNKTWQPLKVLPGHDGKVMCVDVSPDHKYIATTSYDRTFKLWAPE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggacctcatctatgtaaagaaacagaagaccgttcattatggctcg
ctggaagaggcggaacgtgcacggcttgcagctttgcaagttgctgtcgaaactacagac
gaggagaaggatatcacaaatgcgaatgatatcatcaatgcttccaatttggtcggcaat
gtgcacatttcaaacgagtatatggaactcgaggatgaaatgtccaaagatcgccaggca
ttactggaagaattcgaacgtaggaaaaaggccagacagattaatgtttccacagatgat
tccgaggtaaagaaacacttgagacaattgggtgaaccaatttgtctctttggcgaaggc
cctgcagatagaaggacaagattaagagaattgttagccagtgtaggagaggatgctata
aaaaagaagcacgaagaagaggagaaaccgcttcatacagttgaaaaggatacggagaca
acttggtatcatgagggcccagaatctttgcgaattgcacgatcgtggatagcaacatat
tcattgcccagagcaaaggcgcgattgaacgaggccagacaagatctagaattaccaact
gcgactcgtacagcgaaaagacaagaacttttgaagaagttgcaagcattgagcatttat
tgctctcaactcggggatacgaggccgatttctttttgtcagtttagccctaattcaaag
attcttgctaccgcatcatggtcaggcttgtgcaaattatggtctgtacctgactgtact
ttgttgcgcactttaaaaggacatacttgtaatgttggctgtattgtttttcatccaaaa
gctacgataaccgaagatgtgataggtgataatgcaggacagacttgcacgctggcatct
tgcgcatcagatggtactgtgaaattgtggggcggaggcaatggcgaagaaccactggcg
gaagtagaaggacacgagcctcatagagtttctaggatagcgtttcatccgtccggacga
tttcttggcacgtgttgctacgacgcatcttggcgattgtgggatttagagcagcaagca
gaggtacttcatcaagaaggtcactctagagctgtacattgtattagctttcagtgcgac
ggaagcgtttgcgctacaggcagtcacgattcttttggtagagtatgggatttgcgtacc
ggcagatgtataatgtttatggagggtcatctaacatccatctacggcgttgatttctcg
ccgaatggttttcatatagcgacagcgagtgaggataacacttgcaagatatgggacttg
cgaaagaggacctgcatatacacgataccggcgcataccagcttattgtccgatgtgaaa
taccagagaatagaaggacaatatttagttactgcatcttacgacaacacagccaagatc
tggtccaataaaacgtggcaaccgctcaaggtgttaccaggtcatgacggaaaagtcatg
tgcgtcgatgtgtctcctgatcacaaatatatcgcgactacttcgtatgacagaactttt
aaattatgggctccagaataa
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integrated database retrieval system
