KEGG   Formica exsecta (narrow-headed ant): 115242997
Entry
115242997         CDS       T07422                                 
Name
(RefSeq) histone deacetylase Rpd3-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
fex  Formica exsecta (narrow-headed ant)
Pathway
fex03082  ATP-dependent chromatin remodeling
fex03083  Polycomb repressive complex
fex04213  Longevity regulating pathway - multiple species
fex04330  Notch signaling pathway
fex04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:fex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115242997
   03083 Polycomb repressive complex
    115242997
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    115242997
   04350 TGF-beta signaling pathway
    115242997
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    115242997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fex03036]
    115242997
Enzymes [BR:fex01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115242997
Chromosome and associated proteins [BR:fex03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     115242997
   HDAC complexes
    Sin3A-HDAC complex
     115242997
    BRAF-HDAC complex
     115242997
    REST complex
     115242997
    SHIP complex
     115242997
    MiDAC complex
     115242997
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     115242997
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115242997
  Chromatin remodeling factors
   NuRD complex
    115242997
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 115242997
NCBI-ProteinID: XP_029675502
LinkDB
Position
Unknown
AA seq 499 aa
MDPVKMSMQPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYR
PHKATADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAG
GSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI
DVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDE
SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPF
LMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNT
PEYLEKIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEAEEKVNPDDRLPQRDLDKRI
QHENEYTDSEDEGEGARRDNRSYKGSRDRKRPRLEKGQEAIDSDIKKEEDIKSEPKENEK
DEKTNSTNEEAKKDGGANP
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggatcccgtaaaaatgtccatgcagccgcacagcaggaaacgtgtttgctactattat
gacagcgatatcggaaattattactatggtcaaggacaccctatgaagccacatcgtata
aggatgacgcacaatctacttctgaattatggtctttatagaaagatggaaatatatcga
cctcataaagccacagcagatgaaatgacaaaattccatagcgatgagtatatcagattt
ctgagatccataagaccagacaacatgtctgaatataacaaacaaatgcaacgatttaat
gtaggagaagattgccctgtttttgatggtttgtatgagttttgtcaattatcggctggt
ggatctgtagctgctgctgtaaaactcaacaaacaagcctcagaaatctgcatcaattgg
ggcggtggcttgcatcacgcgaaaaagagcgaagcgtcaggtttctgctatgtgaatgac
attgtacttggaatcttggaattgctaaaatatcatcagagagttctgtacattgacatt
gatgttcatcatggcgacggtgtagaggaagctttttatacaacagatagagtaatgaca
gtctcatttcataaatatggcgaatacttccctggaactggagatctccgtgatattgga
gcagggaagggaaagtattatgcagttaatatacctttgagagatggcatggatgatgaa
agttacgaatctatattcgtccctattatttcaaaagtaatggaaacttttcaaccctct
gctgtggttttgcaatgtggtgcggactcattgactggcgatcgactgggatgttttaac
ttgactgtgaggggtcatggtaaatgtgtggaatttgttaaaaagtataatttgccattc
ttgatggtaggaggtggtggttatacaattaggaatgtgtccagatgttggacatatgag
acatctgtagctctggggtctgaaattgcgaatgaacttccatataatgattactttgag
tattttggccctgactttaagctgcatattagtccttcaaatatggcgaatcaaaacact
cccgaatatcttgagaaaataaaaacaagactatttgaaaacttaagaatgctacctcat
gcacctggtgtccaagttcaagcaattccagaggatggtgctgtcatcgaggattcggaa
gctgaagagaaggtaaatccagatgacagattacctcaacgcgacttggacaagagaata
caacatgaaaatgaatataccgacagcgaagacgaaggagaaggtgcgcgaagagataat
agatcatataagggatctagagatagaaagcgaccgcgtttggaaaaaggtcaggaggcc
attgattctgatataaagaaggaagaagatataaaatcggagccgaaagaaaatgaaaaa
gacgaaaaaacgaattctacaaatgaagaggcgaagaaggacggcggagcgaatccctga

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