Formica exsecta (narrow-headed ant): 115243027
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Entry
115243027 CDS
T07422
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fex04121
]
115243027
Ubiquitin system [BR:
fex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
115243027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
115243027
NCBI-ProteinID:
XP_029675543
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
RQLKLAGNLARSSGSGGGGGGGGGRTGGGRTGGSGGNNGGAAGGGAASRNAGTAGAAAEP
GIVADEAAGPAGGHLIEWEENDRFSFDDSDRFEEDSLCSFSSEPESLCNNWRGWRRPTAT
FGLSKKFYEDAQQAVPTLCELSARCVASHIPFELVEHFYPPVPEQLQLRIAFWSFPDNEE
DIRLYSCLANGSADEFVRGEHLYRAKTVKEPLQIGFHLSASVNSQTNGVRAQFNVAVTFD
RRRITSCNCTCSSTAYWCAHVVAVCLHRIHMPTQVCLRAPVSESLSRLHREQLQKFAQYL
ISELPQQILPTAQRLLDELLSTQPSAINSYCGAPDPTAGASAHDQTSWYLDEKTLHDNIK
KILIKFCVPAPIVFSDVNYLSTTAPPAASEWASLLRPLRGREPEGMWNLLSIVREMFKRN
DRNAIPLLEIITEECMACEQILVWWFNTKVALLNGTGYGSKHNMNSNVHASQHACSSLCD
EIVVLWRLAALNPGLSPAEREMLHAQFMAWHLKIIDKVAKCRGSSVSHNSHNRSNSSQKD
SLKHDLAVFTGFKSALEACYLDWDEYVLPGITYTAENNPMYHCPFTCFRHAGDTRTEVNQ
VNSSSAVLNYQPPISHHHGRRPMNVGLVEYGYLDRRRLNPREFPMCSRSGGGDGNRSSVS
SEGFCENDTDIPDISESQVVLRQGCAQLNNCGDTDSQEGAGSESSSNSNVSMKNAQGSDK
HRSNASSETHSDSSDSSNNKPTCENGKCNRTNLAECRDKSRVAVSKGIGVKNEQESDQEK
EAGRPFKDESSSSSSDSPSGDEYNVYYYDPKAVTNNSGLPSKYVKGNMHAAATPDASIVL
NNLKKTEDPWDILFARAEGLYAHGHTREACIIGVQLAEELLANPPDLMIEGPPVPVKNKR
KRQHVNPASHQVTCLASATLAKCGFLCTVLAENPEYHNLAFRVGLFGLEMARPPANTKPL
EVKLAYQESDLVGLLKRIPLGPTELAMIKQRAEQLRDGVMRSRGHALLPIMLASFIYDAL
DVPRVKLPAEIDSNLGFDAAVAVLGLKANVSEADHPLLCEGTRRQRGDLAITLLVHYKDD
PVKLARIMDKLLDRDVHQLIKSPILSSYYTSNPPTKSEMARFVHDEERSSPLNGTDNGGN
GDNIVGTSSRPHSSTSAELESGISALTIQPQIVQPPVPIRTKETRYKSKRLYPSIPNQPS
EASAHFMCELAKTVLSKAGGTSSTSLFTQPSTSQNHHGPHRALHMCAFQLGLYALGLHNC
VSPNWLSRTYSSHVSWITGQAMEIGAPAIWFLIDSWEGHLTPPEAVSIADKSSRGSDPNM
VRAAAELALSCLPHAHALNPNEIQRAISQCKEQSEAMLEKACITVENTAKGGGVYPEVLF
QVAKYWYELYLRQTPGGDQQDEIPHDPLQLDLNGVLLVEPGPSVDLSNTQMMPGPAQTVV
VTSTQPPPQPYTHPTITTLAPLGVGMPYAVGPYSFIHPHHSIATFSGPIPSHRVTLPPAP
HMQMYPFPHHPGHPQHPPHPHHPSPAAPPPPGPYYTPQPPPTPGTRHLYTMQQPMPVQTG
VAGPLPGQNTLPGPALVQPQPIISTVRAQPQVHRQSQTFSQQQLRTLVSAYRVGMLALET
LARRVHDDRPQAKYARNPPYGEDVKFLLRVAKRLGTQYMHQLCICAVNSIVSPFVLHHVA
LEAAQYLARNNPALIVQHLRSALLAPLVHKCQQMYIQCMHQKLYHLTTSDYEEFASIVCA
ARAAFQINPEGNTQFKEWLQSIKRSQSCNKDLWAQINAALQQTGK
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
cggcaattaaaactggcgggcaacctggctcggtcttccggcagcggcggcggcggcgga
ggcggcggcggacgaaccggcggcggtagaaccgggggtagtggtggtaacaacggcggt
gccgccggcggtggcgcggcgtcgaggaacgcggggacggccggtgccgccgccgaaccc
ggaatcgtcgcggacgaggccgccggaccggccggtgggcatttaatcgagtgggaagaa
aatgatcgtttctccttcgacgactcggaccgcttcgaggaggactccctgtgcagtttc
agcagcgagcccgaatccctttgtaacaattggcgaggatggagacggccgacggcgacg
ttcgggctttccaagaagttctacgaagatgcacaacaagcggtgccaactctttgcgaa
ctttcggcacgatgcgtcgcgtctcatattcctttcgagttggtggagcacttttatcct
cctgtaccggagcagctccagctgagaatagctttctggagcttccccgataacgaagag
gatatacggctttattcgtgtctcgcgaatggtagtgccgatgaattcgtccgtggcgaa
catctctatcgtgcgaaaaccgtcaaggagccattgcagatcggattccatctgagcgcc
agcgtgaactcacaaacgaatggggtcagagcgcagttcaacgtcgctgtaacctttgac
cgacgcaggatcacatcatgtaactgtacctgctcctcaacggcctattggtgcgcgcac
gtggtagccgtttgcctgcacagaatacacatgccaacacaagtatgtttgagggcgccg
gttagtgaatccttatctcgtctgcaccgggaacaactgcaaaagttcgctcaatacctc
atcagtgaattgccacagcagattttacctactgctcaacggcttctggatgaactgctc
tcgactcaaccgagcgccattaacagttattgcggagcaccggatccgaccgccggtgct
tccgctcacgatcagacttcctggtacttggacgagaagacattgcacgataacatcaag
aagatcctcatcaagttctgcgttccagctcccatagtcttcagtgatgttaattatcta
agcactaccgcgccgccggccgcttccgaatgggcatcgttactgcgaccgctcaggggt
cgcgaaccggagggtatgtggaatcttctttctattgtgcgagagatgtttaaaaggaat
gatcgcaacgccatccctctgctggaaatcatcacggaggaatgtatggcctgcgaacaa
atcctcgtctggtggttcaacaccaaggttgcattactgaacggcactggatacggcagc
aagcataatatgaacagcaacgttcacgcgtctcagcacgcgtgctcatctctgtgcgac
gagatcgtcgttctttggcgattggccgctctcaatcccggtctctcgccggcggaacgc
gagatgctgcatgctcaatttatggcttggcatttgaagatcatagataaagttgctaag
tgccgtggcagttctgtctcgcataactcgcataatagaagcaatagttcacagaaggat
tccctgaaacatgatctcgcagtctttaccggattcaagtcggcactcgaggcttgctac
ttagattgggatgaatacgtcttgccgggaatcacgtataccgccgaaaataatcctatg
tatcactgtccctttacctgttttcgacacgccggcgatacgaggacggaagttaatcag
gtaaattccagttcagcggtattgaattatcaaccaccgatctcgcatcatcatggtcga
cggccgatgaatgtcggtcttgtcgaatacggctacttggacagacgacggctgaatccg
cgcgaattcccaatgtgttcgagaagcggtggcggcgacggaaatcgcagcagcgttagc
tccgaaggtttctgcgagaatgacaccgacattcccgatatatctgagtctcaggttgtt
cttaggcaaggttgtgctcaattaaataattgcggcgacactgattcgcaggaaggggct
ggtagcgagtcatcttccaacagtaacgttagcatgaagaacgctcaaggctcggacaag
catcgctcaaacgcctcgtccgagacacatagtgatagtagtgatagtagtaataacaaa
cctacttgcgaaaacggaaagtgtaataggacgaatctcgcggagtgtcgtgacaagtcg
cgcgtggctgtgtccaaagggataggtgttaaaaacgaacaagaatccgatcaggagaaa
gaagccggtagaccgttcaaggacgagagctcctcgtccagtagtgatagtccttccggc
gacgagtacaatgtttattattatgatccgaaagcagtgactaacaacagcggtctgccg
agtaaatatgttaaaggcaatatgcatgctgccgccactccggatgctagtatagttctg
aataatttgaagaagacggaagatccatgggacattctgttcgcgcgggcagagggactt
tatgctcatggtcatacgagggaagcctgtattattggggtacaactggccgaggaactt
ttggcgaaccctccggatcttatgatcgaaggaccgccagtgccggtgaaaaacaagcgg
aaaaggcaacacgtgaatccggcgtctcaccaagtaacgtgtctcgcatcagcgacttta
gcaaaatgtggattcttatgcacggtacttgccgagaatccggaatatcacaatttagcg
tttcgtgtaggcctttttggcttggaaatggctagaccaccggctaatacaaaacctttg
gaggttaaacttgcttatcaagaaagcgatttggtaggtttgctaaagagaattcccttg
ggaccgacagaattagctatgataaaacaaagagccgaacaactgagagatggtgttatg
agatcaagaggacatgcgctcttgcccattatgttagctagcttcatatatgatgcgctt
gatgtaccaagagtgaaactacctgcagaaattgattcaaatctcggatttgatgctgct
gtggctgtcctgggattgaaggcgaatgtgagcgaagcagatcatccacttctttgtgaa
ggaactcgtagacagagaggtgatttggctattactttgctcgtgcattacaaagatgat
cccgtgaaattggccagaatcatggacaaattgttggatcgagacgttcatcaactcatt
aaatcacccattcttagtagttattacacttcgaatccacctactaaaagcgaaatggca
cgatttgttcacgatgaagaacgttcgtcgccgctcaatggaacagacaatggcggaaat
ggtgataacatcgtcggcactagcagtagacctcatagcagtacgagcgcggaattggag
agtggtatcagtgcactaaccatacaaccgcaaattgttcagccacccgtgcctattaga
actaaagaaacgcgatataagagtaaaaggctatatccatctattcccaatcaaccttcg
gaagcgagtgcgcactttatgtgcgaattagcaaagaccgtgttatcaaaggccggtggt
accagctcaacttctctattcactcaaccatctaccagtcaaaatcatcatggtccgcat
agagcgcttcacatgtgcgcctttcaacttggcttgtacgcccttggactccataactgc
gtcagtccgaattggcttagtcgtacatattcgagtcacgtatcttggataacaggccaa
gcgatggaaattggtgcgccagccatctggttcctcatcgacagctgggaaggacacctg
acgccaccggaagctgtcagtatagccgataagtcttcgagaggtagcgatccgaatatg
gtcagagcggcggcggagcttgctttatcttgcttaccgcacgcgcatgcgctcaatccc
aatgagattcagagagccatatctcaatgcaaggaacaaagtgaggccatgctggagaaa
gcttgtattacagtggagaataccgcgaaaggtggcggtgtttatccagaggtacttttc
caagtggcaaagtattggtacgagttatatctgcggcaaactcctggtggagatcaacag
gatgagattccacatgatcctctgcaattggatctcaatggggtactattagtcgaacca
ggaccgtccgtggatctatcgaatactcagatgatgcccggaccggcccaaacagttgtc
gttactagcacgcaaccacctcctcagccctatactcatccaacaattacaactctggcg
cctttaggagtcggtatgccgtatgccgtaggcccgtacagttttatacatcctcatcat
tctatcgcgacgttcagcggtccgataccttcgcatcgagtcactttaccgcctgcgccg
cacatgcaaatgtatccgtttccgcatcatcctggacaccctcaacatccaccgcatcca
catcatccatctccggccgccccacctccacctggaccgtattacacgccgcaacctcca
ccgacgccaggaacgcgtcatttatacacgatgcaacaacctatgccggtccaaacagga
gtagcgggtcctcttcctggtcaaaatactttgcctggtcctgcgctagtccagccacag
cccataatatcgactgtgagagctcaacctcaggttcatagacaaagtcagacatttagt
caacaacaattgcggactcttgtttctgcatatcgtgtgggtatgctagcgttggaaact
ttggctcgcagagtgcatgatgatcgacctcaagccaaatacgcacgtaatccgccctat
ggagaggatgttaagtttttacttagagttgcgaagcggctcggtacacagtacatgcat
cagctctgcatttgtgctgtaaacagcattgttagtccttttgttcttcatcatgttgct
ctggaagcggcccaatatctcgctagaaacaatccggcgctcatcgtacagcatctgaga
tctgccttgttggctcctctagtgcataaatgccaacaaatgtatattcaatgcatgcat
caaaaactgtatcatttaacgactagtgattatgaagagtttgcgagtatcgtctgcgca
gcaagagctgcctttcaaatcaatcccgaaggaaatactcagttcaaggagtggctacaa
tcgatcaaaagatctcagtcgtgtaataaggatctgtgggcgcagatcaacgcggcgtta
caacagaccggcaaatga
DBGET
integrated database retrieval system
