Formica exsecta (narrow-headed ant): 115243320
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Entry
115243320 CDS
T07422
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fex03009
]
115243320
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115243320
Ribosome biogenesis [BR:
fex03009
]
Eukaryotic type
Pre-60S particles
Helicases
115243320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WIV_dom
Motif
Other DBs
NCBI-GeneID:
115243320
NCBI-ProteinID:
XP_029676058
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MDMSINELDEEDEVKPKNFHELELDDRLLKAIAKLSWTEPTLIQEKTIPLILEGKDVLIR
ARTGSGKTAAFAVPLIQKILVNKRTQKKQQIKGLIVAPSKELCKQIYNVIMCLTIKCYRE
IRVIDISPQTDLNAQKPLLNEMPDIIVVTPGRLLQHLKAGNLMLKHSLETLIIDEADLLF
SFGYENEIKAVLTYLPTAYQAILASATLSEDVKALKKLVLHNPAILKLEEPPLAPPTQLA
HYILAAEETDKAAILYALLKLHLIRGKTIIFVNTVDRCYKLKLFLEQFGIPTCVLNSELP
ATSRCRAVSQFNSGTYDIIIASDEKALEEPHIIKTKKDKRRKDKESGVARGIDFQFVSNV
INFDYPLDINSYIHRAGRTARGKNQGTALSFVAIRERPLMEKVEEHLKCIYNCENLFKTY
QFKLEEVEGFRYRAKDGWKAVTRIAVREARLKEIRQEVVNCEKLKSYFEDNPRDLQSLRQ
DKALHTVKLQPHLKDVPEYIVPPTLKGIMGIGKRKRKFDRDAASSGATAVKSRHQARASN
PLISLQIATKK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtctataaatgaattagacgaagaagacgaagtaaaaccgaaaaattttcac
gaattggaattagacgacaggctattgaaggctattgcaaaactgagttggacagagccc
acattaatacaagaaaaaacaatacctctgatacttgaaggaaaggatgtcttaattaga
gcacgtacaggttcaggcaaaactgctgcatttgcagtaccacttatccagaaaatatta
gtaaataagcgaacacaaaagaaacagcagattaagggtcttattgttgcacctagtaag
gaactgtgcaagcaaatttacaatgtcatcatgtgcctgactataaaatgctatagagaa
atcagagtaattgacattagtccacaaacagatttaaatgcacagaaaccattactcaat
gaaatgccagatattatagtggttacacctggtcggttattgcagcatctaaaagcagga
aatttgatgctgaaacatagcctagaaacattaataatcgatgaagctgatctgctcttt
tcatttggatatgaaaatgaaattaaagcagtattaacttatctaccaacagcataccaa
gcaattttagcatctgctacattatctgaggatgtcaaagccttgaaaaaattagttcta
cacaatccggcaattttaaaactagaggagccacctttggctcctccaacccaattagct
cattatattttggctgcagaggaaactgataaggctgctattttatatgctttgctgaag
ttacatttaattaggggaaaaaccataatctttgtaaatacagttgatagatgttataaa
ttgaagttgttcctagaacaatttggtattcccacttgtgtcttaaattccgagttaccg
gcgacttcgagatgtagagcagtctcgcaattcaatagtggcacttacgacatcataata
gcatcagatgagaaggcattagaagagccacatataataaaaacgaaaaaggataaacga
aggaaagacaaagaatcgggtgtagcgcgcggcatcgacttccagtttgtgtccaatgta
atcaattttgactatccattggatataaattcttacatacacagagcaggacgcactgct
cgtggaaagaatcaaggaactgcccttagttttgtagcgatcagagaaagaccgctgatg
gagaaagtagaagagcacttaaagtgcatatacaattgcgaaaatctatttaagacttat
caatttaaattggaggaagtggaaggcttccgttatcgtgcaaaagatggttggaaagct
gttacaagaattgctgtccgagaggcacgattaaaagaaattagacaggaagttgtaaat
tgtgaaaagttgaaaagttatttcgaagataatccgcgagatctgcaatcattgcgccaa
gacaaggcattacatactgtgaaactacagccacatttaaaagatgtacctgaatatata
gtaccaccaactttaaaaggtatcatgggaatagggaaaagaaaaagaaaatttgataga
gatgctgcatcatcgggagcaacggctgtcaaatcaagacatcaagctcgcgcgtcaaat
ccgttgataagtttacaaatagcgacaaaaaaataa
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