Formica exsecta (narrow-headed ant): 115243355
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Entry
115243355 CDS
T07422
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fex03000
]
115243355
Transcription factors [BR:
fex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115243355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
115243355
NCBI-ProteinID:
XP_029676135
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MRAGGNMCDGSFTETLRSMQGMTGASPPGGAGVGVGPMGVGLNSPLGPGGKKVQVEHIKR
PMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMK
EHPDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDXXXIGMAGSMGQAGMGTYYGPAAAYGS
LSAASMAAAAAAAAQQSAAMSGLTAPAQVVSSMDAMKYSMEADKYRAAYMPPSTLAMSMY
PDPKYLDSNPKTYLDRSYLDSAKAYFEQSKLYMDQKPTIADYNRSSYEPNKLYEESSPGS
VVGGNGPARSPAAESPDTSKQHERTEQGSSSASSTSTSSAASPGATLPAYYPGPVQAGGL
LGPQMGQYGGYQTAPAPGNESFRRPLTVIF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacggctccttcacggagaccctgcgtagtatgcag
ggcatgacgggagcatcgccaccgggtggtgccggtgtcggtgtcggtcctatgggggtc
ggcctcaacagcccgctcggcccgggtggcaagaaagtgcaagtcgagcacattaaacgg
cccatgaacgccttcatggtctggtcacggctacagcgacggaagattgctcaagaaaat
cccaagatgcacaacagcgaaatctccaaacggctcggtgcggaatggaagcttcttacg
gaagatgaaaaacgcccgttcatcgaccaggccaagaggttacgtgcccaacacatgaag
gaacatccagattacaagtacagaccgcgaaggaaacccaagactctgcggaaagaaggc
tatccttacagtattccatacccaagtgttcccatggacgnnnnnnttatagggatggcc
ggtagcatgggacaagctgggatgggcacctattacggccctgcggcggcttacggttcc
ctgtcggcggccagcatggctgcggccgcggcagcggcagcacaacaatcggcggccatg
tctggtctcacggcacctgctcaggtggtgagctcgatggacgctatgaagtattccatg
gaagctgacaagtatcgcgctgcctacatgccgcccagcaccctggcgatgagtatgtac
ccggaccccaagtacctggactccaatcccaagacctatctggaccggagctacctggac
tcggcgaaggcgtacttcgaacagtccaaactctacatggatcagaaaccgaccatcgct
gattacaatcgatcgagttacgagcccaacaagctctacgaggaatccagcccgggtagc
gtcgtcggcgggaacggacccgcgaggtcgccggccgccgagtcgccggacacgagcaag
cagcacgagagaactgagcagggctcgtccagcgcaagctcgacgtcgacgtcgtcggct
gcgagtcccggtgcgaccctgcccgcttactatcccggaccggtccaggccggcggtctt
ctgggcccgcagatgggccagtacggcggatatcagacggcacccgcgccgggaaacgag
tcctttcgccggccgttgacggtcatcttctga
DBGET
integrated database retrieval system
