KEGG   Formica exsecta (narrow-headed ant): 115243564
Entry
115243564         CDS       T07422                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
fex  Formica exsecta (narrow-headed ant)
Pathway
fex03030  DNA replication
fex03410  Base excision repair
fex03420  Nucleotide excision repair
fex03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115243564
   03410 Base excision repair
    115243564
   03420 Nucleotide excision repair
    115243564
   03430 Mismatch repair
    115243564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fex03032]
    115243564
   03036 Chromosome and associated proteins [BR:fex03036]
    115243564
   03400 DNA repair and recombination proteins [BR:fex03400]
    115243564
DNA replication proteins [BR:fex03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115243564
  DNA Replication Termination Factors
   ELG1-RFC complex
    115243564
Chromosome and associated proteins [BR:fex03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115243564
DNA repair and recombination proteins [BR:fex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115243564
  Check point factors
   HRAD17(Rad24)-RFC complex
    115243564
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 Rad17 AAA_22 AAA_11 AAA_14 bpMoxR RuvB_N DUF815 AAA_30 ResIII AAA_assoc_2 AAA_7 NB-ARC AAA_24 Mg_chelatase AAA_19 AAA_5 AAA_2 nSTAND3 DNAX_ATPase_lid RNA_helicase TniB Bac_DnaA AAA_3 SLFN-g3_helicase MCM Gp44_lid AAA_28 AAA_29
Other DBs
NCBI-GeneID: 115243564
NCBI-ProteinID: XP_029676545
LinkDB
Position
Unknown
AA seq 356 aa
MHAFLKTGKLGAPTDVKKPSTSRAKDDKKDLTPWVEKYRPRNVDDIVEQTEVVNVIRQAM
KHGDFPNMLFYGPPGTGKTSIIHAAARQMFGSMYKDRILELNASDDRGIQVVREKIKSFA
LRRANPIGPDGKKCPPFKIIILDEADSMTGAAQTALRRIMEKEAHSTRFCLVCNYLSRII
KPIASRCTKFRFKPLSDEKSITRLEYICNEENLKADRSVLEKIVEASGGDLRQAVMCLQS
ITRLKGKDYEITVDDALDVIGLIPDDKIDTLWETCKKGSYNNVEKLLEELLLEGYPGSQV
IEQLNEKVVFSDELTDKQKVIIGDMLGECDYKLTEGSDEYLQLLSIFSTILAAWKL
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcacgctttcctgaagactggtaaactaggcgccccaacagatgtgaagaaaccgtca
acttctcgcgctaaggatgacaagaaggacttgacaccatgggtggaaaaataccggccg
agaaatgtcgacgacatcgtggaacagacggaggtggtgaatgtgataaggcaagccatg
aagcacggagactttcctaacatgctgttttatgggccacctggtacagggaaaaccagc
attatccatgcggctgcaaggcagatgtttggtagcatgtacaaggataggatactggaa
ctaaacgcatctgatgatcgaggcatccaggttgtgagggagaagattaagtcctttgca
ctgcgcagggctaatcccatcggaccagacgggaagaaatgtccaccatttaaaatcatc
atattggacgaagcggacagtatgaccggcgccgcgcaaacagcgcttcgtagaattatg
gaaaaagaggctcatagcacgcgtttttgcctggtatgcaattacctgtcgcgaattatc
aagccgatagcgtcgcgctgcaccaaattccggttcaagccattgagcgatgagaagagt
atcaccagacttgaatatatatgcaatgaggaaaatctgaaggctgatagaagcgttcta
gagaaaatcgttgaagcatcgggcggcgatttgagacaggctgtaatgtgtctgcagtcg
atcacacgattgaagggcaaggactacgagatcaccgtggacgatgctctcgatgtgatc
ggactaattcccgatgataaaattgatacactatgggagacctgtaaaaaagggagttat
aataatgtcgaaaagttgctcgaagagttgctgctggaaggatatccgggttcacaggta
attgaacaattaaacgagaaagtagttttctctgatgaacttactgacaagcagaaagtg
ataattggcgatatgctcggggaatgcgattataaattaacggaaggaagtgacgaatat
ctgcagcttttaagtatattttctaccatcttagcagcgtggaagttataa

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