Formica exsecta (narrow-headed ant): 115243758
Help
Entry
115243758 CDS
T07422
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fex01009
]
115243758
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115243758
04131 Membrane trafficking [BR:
fex04131
]
115243758
03036 Chromosome and associated proteins [BR:
fex03036
]
115243758
Enzymes [BR:
fex01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115243758
Protein phosphatases and associated proteins [BR:
fex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115243758
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115243758
Membrane trafficking [BR:
fex04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115243758
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
115243758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Rad17
DyP_N
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
115243758
NCBI-ProteinID:
XP_029676816
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MTEPTVRSDLFTAAKQLADSEIELIKVIESSSKCEETATNMFESVKKTRKTGKSKNVRPS
AALLAAKREAAQRQLLFGKKSNNSFIRDIYQNAIDAYKIVRKETGLVFDRSMAEHECLWD
SNYPECPARFTQVLQRCEELGLVQRCKLIEARLATESEILTKHSQKQIDILKATDGCADS
ENLELLSSKYDAIFVHPSTYKLSLLAVGSTMNLVESICKGEIQNGMAIIRPPGHHAMKSE
YCGYCFFNNVALAAEKALSSNLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHG
GFWPNLKESNFHYIGEDLGEGYNFNVPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLIIV
SAGYDAALGCPEFSPDLILISAGFDAAIGDEKGEMLVTPACYSHLLSSLLSLAAGKVAVV
LEGGYCLKSLAEGAALTLRTLLGDPCPILQTLDLPSSSIRDTILNVIYAHKPYWKCYQYQ
DMYINTQVAYEEELANRHAVMVTYKGSIFKPDKYETRNCYPTQSKEILEIMDKKLNELIL
YLNIKTHMIYKRRLKYIYNFLFNSKQVTEKRKKNMIISFSHXTKGRSATIEELSLAHSED
YIDSINRTSTLKPKELQKQASDYNSVYLHTETWSSACVSAGCLLQMVDAVLNGEDQSGIA
IVRPPGHHAEEDIACGFCIFNNVAIAAQYAVQFHHIKRVLIVDWDVHHGNGTQSIFEEDP
KILYISVHRYDNGSFFPNSKRANYTNVGLNAGEGFNVNIPWNKKGMGDAEYIAAFQQIVM
PIAYQFNPELILVSAGFDACVGDPLGGCLVSPELYGHLIHWLSSLANGRIILSLEGGYNI
NSISHAMTMCTKALLGDPLPMLDPGLIPCASAVNSINNVLKTHKKFWSNLQYGMSLPKEK
LLPKLKKTLNKLDEQGRITEKPKQTESKIALEVIESEKLELNLEIDKNCLNLVTDEEILK
LTNEVENIKIKNSELRPTRSATDETRRNPGLKKNEVKKLDVSQSIQKCLNKTNQSRDSQQ
GGSRTRENRDNENAISQIHNTPLGSLRQYLSENFQALTAEEMFAVIPLRDCPHLFTVNEV
PPGGIDVTLPCMECASTAENWICLQCYTVHCARSVNQHAMQHAEECEHPITLSFSDISVW
CYGCEAYIDNPRLYAARNAAHQSKFNAQLPWTYNENDI
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctacagtgagatcggatttattcactgctgctaaacaattagcagacagt
gaaattgagctaataaaagtgattgaaagttccagcaagtgtgaagaaactgctacaaat
atgtttgaaagtgttaagaaaacaaggaagactggaaaatcaaaaaatgttcgtccatca
gctgcactattggcggccaaacgagaggcagcgcaacgacagctgctgttcggcaagaag
tccaataacagttttatacgagacatatatcaaaatgcaattgatgcatataaaatagtg
cgaaaggagactggtcttgtatttgatcgaagtatggcagagcatgaatgtctctgggat
tcaaattaccccgaatgccctgctagatttacacaagttttgcagaggtgtgaagaactg
ggtttggtgcaaagatgtaagctcatcgaagcaagactggctacagagagtgagattctg
acaaagcacagccaaaaacaaattgatatcctgaaagcgacagatggctgtgcagattct
gagaatttggaattgctctcctctaagtacgatgctatcttcgttcatccatctacatat
aaattatctttactagctgtgggctcaacgatgaatttggtggaaagtatctgtaaaggc
gagattcaaaatggtatggctattattagaccaccaggtcatcatgccatgaaatcagaa
tattgtggttattgttttttcaacaatgtggctcttgcagcagagaaagctttgagcagt
aatttggccaatagaattttaattgtagattgggatgttcatcatggacaagcaacgcag
caaatgttttacaatgatccacgtgtagtttatttttcaatacatcgttatgaacacggc
ggattctggcctaatttgaaggaatctaattttcattatattggagaggatctcggagag
ggttacaactttaatgtacccttaaataagactggcatgaccaatgctgattacattgcg
atcttccagcaagttctattgccaatggcttatgaatttcaaccagatcttataatagta
tcagctggttatgatgcagctctaggttgtccagagttctctccagacctcatccttatt
tccgctggattcgatgccgcaatcggtgacgagaagggtgagatgttagtaaccccagcg
tgttattctcatttactatcatcgttattaagtctagcagctggaaaagtcgccgtagtt
ttagagggtggttattgcttaaaatctttagcagagggtgcagcactgactttaagaact
ttactgggtgatccatgtcctattttacaaacacttgacttgccatcatcaagtatacgt
gacactattctgaatgtaatctatgcacacaaaccatattggaaatgttatcagtaccaa
gatatgtatatcaatacccaagtagcttatgaggaggaacttgctaatagacatgcagtt
atggttacatacaaaggtagcatttttaaaccagacaagtatgaaacacggaattgctat
cctacacaaagcaaagaaattttggaaatcatggataagaaattgaatgaattgatacta
tatttaaatattaaaacacatatgatatataaaagacgtctgaaatatatatataacttt
ttatttaactcaaaacaagttacagaaaaaagaaaaaaaaatatgattatttctttttcc
cacnacacaaagggaaggagtgcaacaatagaagaattatccttggctcattcagaagac
tacatcgacagcatcaataggacatcgactttaaaacctaaagaattgcagaagcaagcg
tcggattataattccgtttatcttcacaccgaaacgtggtccagcgcctgcgtgtccgcc
ggttgtcttttacaaatggtagacgcggttttaaatggggaagatcaatccggaatagcc
attgtgagaccaccgggacaccatgctgaggaagatattgcatgcggtttttgtattttt
aacaatgtggctatagctgcacaatacgccgtacaatttcatcatataaagagagtgttg
atagtggattgggatgtgcatcacggtaatggaacacaatctatctttgaagaagatcca
aaaattctttatatttctgttcatcgttatgataacggaagcttctttccaaattccaaa
agagctaattatacgaacgttggtttaaacgcaggcgaaggattcaatgtaaacataccg
tggaacaaaaaagggatgggagatgctgaatacatagcagctttccagcaaatcgtgatg
cccattgcttatcaatttaatccagagctgattttggtttctgctggatttgatgcttgc
gtgggtgatccacttggaggttgcttggtaagtccagagctctacggccatttgatccat
tggctctcgtccctggccaatggtcgcataatcctcagtcttgaaggaggctacaacatc
aattccatttctcatgcaatgaccatgtgcaccaaggctctcttgggcgatcccctgccc
atgctggatcccggtttgatcccctgcgctagcgcggtcaattccatcaacaatgtgcta
aagactcataagaaattctggtctaatctgcaatatggaatgtccttgccaaaagaaaag
ctacttcccaagctcaagaaaactctgaataagcttgacgaacaaggaagaattacagaa
aaaccgaaacaaacggaatcgaaaatcgccttagaagtaatcgaaagcgagaaattggaa
ttgaacttggagatcgataagaattgtttgaatctagtgacagatgaagaaattctgaaa
ttaacaaatgaagtggagaatattaaaattaagaactctgaattacgcccgacgagaagc
gcaacggatgagactaggagaaatcctggattaaaaaaaaacgaagtgaaaaagttggat
gtttcgcaaagtatacaaaaatgcttaaataaaacgaaccaatcgagagacagccagcaa
ggaggttctcgtacacgcgagaatcgtgataacgaaaacgcgatctctcaaatacataac
acaccattgggatctcttaggcaatatctctctgaaaattttcaggctctgacagcggaa
gaaatgttcgcggtgatacctctgcgagattgtcctcacctgttcacagtcaatgaggtt
ccccctggtggaatcgatgtaactttaccttgcatggagtgcgccagtactgcggagaat
tggatctgcctgcaatgttacaccgtacattgtgctcgtagtgtcaatcagcacgcgatg
caacacgcagaggagtgcgagcatcccatcacgctcagtttcagtgacatctccgtttgg
tgctatggttgtgaagcctatatcgataaccctcgattatacgcggcaagaaacgcggct
catcaaagcaagttcaatgcacagcttccttggacttataacgaaaatgacatataa
DBGET
integrated database retrieval system
