Formica exsecta (narrow-headed ant): 115244155
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Entry
115244155 CDS
T07422
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex04140
Autophagy - animal
fex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115244155
04148 Efferocytosis
115244155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fex04131
]
115244155
Membrane trafficking [BR:
fex04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115244155
Hops complex
115244155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-C3H2C3
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-rbx1
COMP
Motif
Other DBs
NCBI-GeneID:
115244155
NCBI-ProteinID:
XP_029677447
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVVAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDKILYL
AVSSNTIVIAMANNILLRIDMKQPDKTEEIDISKYALSMKMSGLFLDPLGYHLLITLVPR
HGDNPLPEIFYLHRKTTKLKQAGKFKGHEITAVGWNFSNISETTSGPILLGTSKGLIFET
EIGLETDKIFNTSLEQYWRQLPNYLPLYGTKEVGGLVFDLGKNSKPPITGIEFHKIPNAD
KYVIIVTTLMRIYQYIGAIGNSEEKPLLQQVFYKYLNAQESFSEVINTLPYSKMQFYYPS
LGALPKSFGWLTEAGILYAQVEPKSDTNILINQQMLTCPETSLMGSNVSQTTLVPLSFVL
TEFHALLLYPDHVKGISLLNQELIFEDIYNDAVGKLIGITKDPATRSIWAYSEQAVFKYR
VTKEDRNVWQVYVDKGEFELARQYCKDNPAHIDQVLIKQAEMLFKNKEYERSALIYADTH
SSFEEISLKFLQEWQIEALKTFLCKKLDGLKTQDKTQITMIVIWVTELFMNQMGALRSSN
TSYLHDSQYLELQKQFDSFLAIPKVEECIRRNRSTIYDLMASHGDKDNLIRLTIMHCNYE
EVIRQHLYKNNYLEALGVLKSQNNKDLFYRFAGILLQELPRPTVAVLISQGSSLKPAKLL
PALVSCNSDEKHAKEIIKFLEFCVYKQSSQEQAIHNFLLSLYARYKQDEVMRYISSQGQD
ISMVHYDVHYALRLCQEVGLTEACVQLSALLGLWATAVDLALTISVDLAKQIAAMPSDHD
DELRKKLWLKIAEHVVREKDDIQQAMKFLQHCDLVRIEDILPFFSDFVTIDHFKEAICNS
LQEYNQHIQDLKEEMQEATKAAELIRKDIQAFRTRCTFVHARDMCNTCEVQLLLRPFYVF
PCGHKFHSDCLVAALTPMLSMDQRTKLADLQRQLTAISNRPEDTTSMTSVSLSTRDQIKA
DIDELVASECLYCGELMIESIDKPFIEEEDYERVMKEWT
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgaacaagcttctcagcgttccaagcaagtggttgca
ccaccaattcgtccagacattagcacagcaggctttattcaaatgaagctgcaagatgat
gggccaattttcactaaacagaaagttaactttctgccatctgataaaattctttacttg
gctgttagtagcaacacaattgtgattgctatggctaacaatatcttattgcgcattgat
atgaaacagcctgacaaaactgaagaaattgatatatccaaatatgcactgagcatgaaa
atgtccggcttgtttctggatccattgggctatcacctgctgataactctagtgccaaga
catggagataatccactaccagagatattctacttgcataggaagacgacaaaactcaag
caggctggcaagttcaagggtcatgaaattactgcggtgggctggaacttttctaacatt
tcggaaacaacctctggtccgattttattgggcacttccaagggtctgatttttgaaaca
gagattggactggagactgacaagatttttaatacaagtttggagcagtattggcgtcag
cttccgaattacctacctctttatggtacaaaagaggtaggaggattggtatttgactta
ggaaaaaatagtaagcctccaatcactggaatagaatttcacaaaatacctaacgcagac
aaatatgtgatcattgtaaccactcttatgcgcatttatcaatatattggtgctattggc
aattccgaagagaaacctctcttgcagcaagtgttctataaatatttgaatgcgcaagag
agtttcagtgaagtaataaatactctgccatattcgaaaatgcaattttactatccatcc
ttgggtgctcttccaaagtcatttggatggttgacagaggctgggattttatatgcccag
gtggaaccgaaatcagatacgaacatactgatcaatcagcagatgttgacgtgcccagaa
acaagtcttatgggcagtaacgtttcacaaaccactttggtaccattgtccttcgtattg
acggaattccacgcattattgctatacccggatcatgtaaagggcatatcgcttctgaat
caggaattaatatttgaagacatatacaatgacgcagttggcaaattaatcggcatcacc
aaggatcccgcgacgagatcgatttgggcttatagtgagcaagccgtctttaaatacaga
gtaacaaaagaagataggaatgtttggcaggtatacgtggacaagggtgagtttgagctg
gctagacagtattgtaaagacaacccggcgcacatcgatcaagtgctcattaagcaggca
gaaatgcttttcaaaaacaaagaatatgagaggagtgctctaatttatgctgatactcat
tcttcctttgaagaaatttcattgaagtttctgcaggaatggcaaattgaagcattgaaa
acgtttctgtgcaagaaactcgatggtttgaagacacaagacaaaacacagataacaatg
attgtaatttgggtgacggagctatttatgaaccaaatgggagccttgcgcagtagcaac
acatcctatctccatgattcgcaatacttagaattgcaaaaacagtttgacagctttctc
gccatccccaaagtcgaggaatgcataaggagaaaccgtagcacgatatacgatttgatg
gccagtcacggcgacaaggacaatttgatacgtcttacgataatgcattgcaactacgag
gaggtgattcgccaacatttgtacaagaataattatctggaggcacttggagtgctcaaa
agccaaaacaataaagatctcttctatcgattcgcggggatattgctgcaagaattgccg
cggcccacagtggctgtcttgatctcgcaaggatcatcgctgaagccggcgaaacttttg
ccagctttggtctcatgcaatagtgatgaaaagcacgcaaaagaaattattaaattctta
gagttttgtgtgtacaagcagagctcgcaagagcaagcaatccacaatttccttctatca
ttgtacgcgcgttacaaacaggacgaagtcatgcgatatataagctctcaaggtcaggat
atcagcatggtgcactatgatgtgcattatgcgttacgattgtgccaggaagtaggcttg
acggaagcctgcgtacagttgtcggctttgctcggtttgtgggctaccgctgtggatctc
gcgcttacgatcagtgtggatctcgctaaacagattgccgccatgccttctgatcatgac
gacgagctaagaaagaaattgtggttaaaaatagcggagcatgtggtacgagaaaaagac
gacatacagcaagcaatgaaatttttgcagcactgcgatttagttaggatagaagatatt
ttgccatttttttccgattttgtcacaattgatcatttcaaggaagccatttgcaactct
ctacaggaatataaccagcatattcaagatcttaaggaggagatgcaagaagccacaaag
gcagcagagctaatcagaaaagatattcaagcctttagaaccagatgcaccttcgtgcat
gcgagggacatgtgcaatacatgtgaggtgcaattgctgttgagacctttctatgtgttt
ccctgcggtcataaatttcatagtgattgtttggtggcggcgttaacgccgatgctgtct
atggatcaaaggacgaagctagcggatcttcagcgacaattaactgccatctcgaatcgc
cctgaagacactacctcgatgacatccgtgtctttgtctacaagagaccaaatcaaagcc
gatattgatgaactggttgcctcggaatgcctttactgtggagagcttatgatagaatca
atagacaagccattcatcgaggaagaggattacgaacgcgtgatgaaagagtggacatga
DBGET
integrated database retrieval system
