Formica exsecta (narrow-headed ant): 115244417
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Entry
115244417 CDS
T07422
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115244417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115244417
03041 Spliceosome [BR:
fex03041
]
115244417
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115244417
Spliceosome [BR:
fex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115244417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
ATAD4
TMCCDC2
DUF6765
Motif
Other DBs
NCBI-GeneID:
115244417
NCBI-ProteinID:
XP_029677887
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MGKENESDGTKKRRKSVNASSGTSMKDGDMYKTIISYEEKEANERLPEDDSECFLATCDN
IRAAMAKIVKLKSSGDPNVKDEIRELQIQTCLAFVELKKLNRMEKFRTKCARDSLVAAKS
SVDSRHLHLQNLLYEVMHLKKEVVKCLQFKSKDELIELVSEEEFYKEAPESISRSEITKN
NPHQLRLARLEWELTQRKQLAVLCDELTESKKAVASSIETKQTRLDNLAPQLHSILEASK
PLQESLGLPLDKIRQEHQKALLLASALYVLYAKASAYRDAYDNTLVVKVEGDEDEAKRAN
NQDGLQESDSDPENQSENIVEEMPVHKKRHHRVSRETRQEEKRSKLLQRHPLHVKIIIIL
KNETKLTLCFYYMIYLKVITVESKLETEDLGGISAGDMLVSESILRELYPRDSGLESPNP
ANQYQLSRHNLGSFSSLGLGIPYRWAQRMAGLQFVSSDMNEQQQKLTSQELAQDCVESVL
KEIKRRVKARLDLCSEIRQLESGNLSIFISTADPVPQKISTSLHRFTTMTWKNYSNYITS
PAFCQKGLVSSVDIFYEAVLRRGSSELVARIAIKPDYPKIAPVFSVSISQMVPASADIIR
DIEREVNVMWTKSPTLTAQIQRLRACFDIYLETESMAPKEKIFFHPVKGRTRARPYKYLS
LGGGIFIHR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaatgaatcggatggtacgaaaaaaagaaggaagtccgtgaatgcaagc
agtggaacgtcgatgaaagacggagacatgtacaagacaataataagttatgaagaaaag
gaagctaatgagagattgcccgaagacgattccgaatgttttttagcgacctgcgacaat
attcgagcagcaatggctaagatagttaaattgaaatccagtggagatccaaatgtgaaa
gatgagattcgtgaattgcaaattcaaacatgcctggcatttgtagaattgaagaagcta
aatcgcatggaaaaatttcgtacaaaatgcgcacgcgattctcttgtggctgcaaaaagc
agtgtagacagtagacatttgcatttacagaatctgttatatgaagtgatgcatttgaaa
aaagaagtcgtcaagtgtcttcaatttaaatccaaagacgaattgatagaacttgtttca
gaagaggaattttataaagaagctccagaaagcatttcacgatctgaaataacaaaaaac
aatcctcatcaattgagattggctcgtttggagtgggaattgacgcaaagaaaacagttg
gcggtgttatgtgatgaactgacagagagcaaaaaggcggtagcatctagtattgaaaca
aaacaaactcgcttagataatcttgcaccacaactgcattctatattagaggcgagcaaa
ccattgcaagagagccttggattgccattagataaaattcgtcaagagcatcaaaaagct
ttgttactcgcatcagcactttatgtattatatgcaaaggcatctgcctatagagacgct
tatgataatacattggtggtcaaagtggaaggtgacgaagatgaagcaaaacgtgcaaac
aatcaggacggtttgcaagagtccgattcagatcctgagaatcaatcggaaaatattgta
gaggaaatgcctgtgcataaaaagagacatcatagagtttctcgggaaactaggcaggaa
gaaaagcggtcaaagctcttgcaacgacacccattgcatgtaaaaatcattatcatatta
aaaaatgagacgaaattgactctttgcttttattacatgatctatttaaaagtcattaca
gtggagtcaaaactcgaaacggaagacttaggaggtattagtgctggagacatgctggta
tcagaatcaattcttcgcgaactatatccgcgagattcgggattggagagtccgaatccc
gccaatcagtatcagttatcacggcataatttgggttcgttctcgtctttgggattaggc
attccttatagatgggcacaaagaatggctggtctgcagtttgtctcatctgatatgaat
gaacaacaacaaaagcttacaagtcaagaattggcacaagattgtgtcgaaagtgtattg
aaagaaatcaagcggcgcgtgaaagcgcggctagatttatgttcggagatacgacaattg
gaatctggtaatctgtcaatcttcatcagcacggcagatccagtgccgcaaaagatctca
acgtcattgcaccgattcacgacgatgacctggaaaaattactcgaattatattacttcg
ccagcattctgccaaaagggattagtatcgtccgtagatatcttctatgaagctgtactt
cgtcgtggcagtagtgaacttgtggcaagaatcgctattaagccagattatccaaaaata
gcaccagtatttagtgtaagtatcagtcaaatggtaccggcatccgccgatatcattaga
gacatcgagagagaagtcaacgtgatgtggacaaaatctccgacgttgacagcgcagata
caacgactgagggcatgtttcgatatctacctagaaactgagagtatggcaccaaaggaa
aagatatttttccatcctgtgaaagggcgaactcgtgctcgaccatacaaatatttgtcg
ctcggaggaggaatatttattcaccgttaa
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