Formica exsecta (narrow-headed ant): 115244557
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Entry
115244557 CDS
T07422
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fex03021
]
115244557
03036 Chromosome and associated proteins [BR:
fex03036
]
115244557
Transcription machinery [BR:
fex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115244557
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115244557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_9
HHH_3
SH2
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
115244557
NCBI-ProteinID:
XP_029678135
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MAQYLDSEADVSEGEEELDHNEKKKLKKLKAMEESDDEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSNHHKKRKQSDDEDFDDRLEDEDYDLIEENLGVRLERKRFKRLRRIQDEES
EEEQEKEADDERDAIANELFEGSGDERDIITEDERRSERSHRPQEAETFEEGSDEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEE
EEDEYLDEDVDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPER
MQLRSVPVTSVPEGSDELDLEAEWIYKQAFCKPTISIQDAHLNAEAKERARKGPQTIGKI
KKALDFMRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFEK
MRNYQLDEIMKNPDAPLPDNVRLIKDDDIERLKNVQTSEELNDVYHHFMLYYSHEIPAMQ
EAVRQKEKKARREERIQRRKQQIAEAEENGEDPPEEDEAQEEEEIDDTLKQAVRSGPYSI
CRKAGLDSLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIANEYCSSRFKIAEEILK
AAQLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPIYTMKYLKDKPVR
DLVGVQFLNLVIAEEDKLITITLSDSIEGNTSGNYVDEMKQLYCRDEFSKLVQDWNALRV
GSVELALNRMVIPNLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPYSCEFPEEEDEEW
DTSKGLRVMGLAYVPDYSQAAFTCLVAADGECTDYLRLAHLMKRKNSYREDEKVMKEADL
LALKNFIATKKPHVIVIAGESREANMIADDIKDCITNLTGEEQFPSIQVEICDNELAKIY
SNSNKGISEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLRYHSLQDQLPKEE
LLENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLEN
RTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDA
LEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYK
DLRVSYQSPSAEKLFDVLTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEET
CLWQCPFCLKNDFPELSEVWNHFDAGACPGKAVGVRLRLDNGISGYIHIKNLSDRHVANP
CERVGMGQIIHCRIIKIEVDRFSVECTSKSSDLSDKNHEWRPQRDPFYDTETEQKDMKVE
EDAKKAKQRQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKV
TDDILQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYK
PTVEGIKDKAEEVLKEQKKENPGGIPYIVSAARTYPGKFLLSYLPRTRCRHEYVTVTSEG
FKFRGQMFGRVSDLLRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYTATPGAVSGMNQEAI
QRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTAGAAGYGGVHTYPNTPYTPSGQTPFMT
PYQTPHHTPHHGQPTPRYGQQTPSHHQGPFVHPPPPSMTPGHHRSAQSHRPTPPLSTPSG
DPTDWKKAAEAWARLKSNPRVSGSTPRYEESRKTPRSYEESVGRTTPSGRSRPSSTRTPS
YKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtatctagattcagaggcggacgtaagcgagggggaggaggaactagatcac
aacgaaaaaaagaaattgaaaaagctaaaggcgatggaggaaagcgatgatgaagaggaa
gacgatgaggatcaattacgcgaagaattgaaagatttgatagatgacaatcccatagag
gaaagcgagggtgaagacagtgatggctcgaaccatcataagaagcgtaaacaaagtgat
gatgaggattttgatgatcgcttggaagacgaagattatgatttgattgaagaaaattta
ggtgttagacttgagaggaaacgttttaaacgtcttcgaagaattcaggatgaagaatca
gaggaagagcaagaaaaggaagcggatgatgaaagggatgccattgccaatgaattattt
gaaggttctggagatgaaagggacattatcacggaggatgaaagacgaagcgaacgaagt
cacagaccgcaggaggcagaaacatttgaagaaggcagtgacgaaggagaatacactgac
gcggatgactttattgttgacgacgatggcagacctattgcggagaagagaaaaaagaag
aagccaatattttccgacgcagcgttgcaagaagcgcaagatattttcggtgttgatttc
gattatgacgaatttggtaagtatggcgaggaggattacgaggaggaggaagaggaagag
gaggaagatgaatatttagatgaagatgtcgacgccgaacggccgcgacgacctaaaaag
cagctgaagaaaaagacgacgagaaagagtatctttgagatttatgagcccagcgaattg
aaacgcggtcactttaccgacatggataacgagatacgtaatacggatataccagagaga
atgcaactgcgatctgtaccggtcacatcggtcccagagggctccgatgaactcgatctc
gaggcagagtggatctacaagcaagcgttttgcaaacccacaatctcgattcaagatgct
catttgaacgccgaggctaaggaacgggcgcgaaagggaccgcagaccatcggcaagatc
aagaaggccttagacttcatgcgcaatcaacacttcgaagttccttttatatccttctac
aggaaggagtatgtgctacccgagctaaacatcaatgacctgtggaaggtgtacaagttt
gatgcaaaatggtgtcaactgcgccagcggaaagagaatctgcttaagttgtttgaaaaa
atgcgcaactatcagctggatgaaattatgaaaaatccggacgcgccgctgccggacaac
gtgcgattgattaaagatgatgacattgagcggctgaaaaatgtacagacaagtgaggag
cttaacgatgtctatcatcacttcatgttatactattctcacgagattccggcgatgcag
gaagccgtgcggcagaaggagaaaaaggcgcggcgcgaagaaaggatccagcgacgcaaa
caacagatcgccgaggcggaggagaacggggaggatcccccggaggaagacgaggcgcag
gaggaagaagaaatcgatgacacactgaagcaagcagtgagaagcggtccatattctatc
tgccggaaagccggcctggacagtctggcgaaaaaatttggcctaacgcctgagcactac
gccgagaatctacgggacaattatcagcgtcacgaggtggatcaggaaccaaccgaaccg
acaacgatcgcaaacgagtattgtagttcgcgattcaagatcgcagaagaaatattaaag
gctgctcagctgatggtagcgatccagcttgcacgtgagccactcgtgcgcaaatgcgtg
cgcgagatgtacatggaacgcgccaagatctccgtgaaaccgacaaaaaagggcatcaaa
gaaatcgatgagaaccatcccatttacactatgaagtatttgaaggacaaacctgtacgt
gatctagtgggcgttcagtttttgaatttagtgattgccgaggaggacaaactcatcacg
attactctcagtgactcaatcgaaggcaataccagcggcaattacgtagacgagatgaaa
caactttactgccgagatgagttcagtaaactcgtgcaggactggaacgcactgcgcgtc
ggtagcgtcgagctcgcgcttaaccgcatggtcataccgaatctgaagaaggaattacgc
acaaacttgattgccgaagcaaaggaatgcgtgatgcgtgcatgttgtcgcaagatgtac
aattggatcaaggtcgcaccatacagctgcgagtttcccgaggaagaggacgaagaatgg
gatactagtaaaggtcttcgcgttatgggcttggcctacgtgcccgactattctcaggca
gccttcacctgtttggtcgcagctgatggcgagtgtacagattacctgcgtctggcgcat
ctgatgaaacgcaagaacagttatcgcgaggatgaaaaggttatgaaggaggccgacctg
ctagccttgaagaatttcatagccacgaagaagccgcacgttatagtgatagccggtgag
tcccgggaagcgaacatgatcgctgacgacatcaaggattgcatcaccaatctgacgggg
gaggagcaatttcccagtatccaggtagaaatctgtgacaatgagcttgcgaagatctat
tccaatagtaacaagggtatctcggaattccgggattatccggaactgttgcgccaggct
atttcgctggcgagaagaatgcaggatccgctagtagaattttcgcaattatgtactgcg
gacgaggaaattctctgcctcaggtatcatagtctgcaggatcagctacctaaagaagag
ttactggaaaatttgtatctggagttcgtcaaccgcgtgaacgaggtcggcgtagatgtg
aacaaggcagttcaacaagcgtactgcggcaatctcgttcaatttgtttgcggtcttggc
ccgcgaaagggtcaagcgttaattaaaatgctgaagcagacgaatcagcggctggagaac
aggacgcaattagttacggcgtgtcatatgggaccgaaagtgtttatcaattgtgccggc
ttcatcaagattgacaccaacagcctgggcgacagtaccgaggcgtacgtagaagtgctt
gatggctcgcgcgtgcatcccgagacttatgagtgggctagaaaaatggcagttgacgca
ttagaatatgacgatgaagacgctaatcccgccggtgctcttgaagagatacttgaatca
ccggagcgtctgaaggacttggatctcgacgctttcgcggaggagcttgagcggcagggt
ttcggcaacaagtgtgtcactctgtacgatatcagggccgaattgaatagccgctataag
gatctccgtgtatcgtatcaatcgccaagcgcggagaagctattcgacgttctgacgaag
gagacacctgagactttctacgtcggtaagctagtgctggccacagtggtcggtatcagt
caccggaaaccgcagggtgatcaactcgatcaggcaaatccagtgcgaaacgaagaaact
tgcctgtggcagtgtccgttctgcttaaaaaacgattttcccgaattgtcagaggtatgg
aatcactttgatgccggagcctgtccaggtaaggccgtcggcgtgagactgcggctggac
aatggtatatctggctatatccatatcaaaaacttatccgatcgacacgtcgcaaatccc
tgcgaaagagtcggtatggggcaaatcatccattgccgtattattaaaatcgaagtggat
cgattcagcgtcgagtgcaccagcaaaagtagcgacctatctgacaaaaaccatgaatgg
agaccgcaacgggatccattttacgatactgagactgagcagaaggacatgaaggtggag
gaagatgcgaagaaagcgaagcaacgacaaatttacgtgaaacgcgtgattgtccatccg
tctttccataacattagtttcgccgagaccgtgaaactgatgcagacgatgaaacaaggc
gaagcgatagtgagaccgagtagtaagggtgctgatcacttgacagtcacttggaaggtt
accgatgatatcctgcaacacattgacgttcgcgaggagggcaaagaaaacgctttttca
ttgggacaaagtctttggattggtaatgaggagttcgaggatttggatgagattattgct
cgacacgttaatcctatggctgcttatgcttccgaattgctagattttaagtattataag
ccaaccgtggagggaatcaaagacaaagcggaggaggtattgaaggaacaaaagaaggag
aaccctggtgggattccctacatagtatcggcagctaggacctatcctggaaagtttctg
ctctcgtatttgccacgcactcgttgtcgccatgaatacgtcacagtgacgtccgagggc
ttcaaatttcgcggacagatgtttggtagggtgagcgacttgttgcgctggttcaaggaa
catttcagagatccggtccctgggcaatccactcccagtacaccacgcggtgcgatgact
tctagaacaccttacactgctacaccgggagcagttagcggaatgaatcaagaagcaatc
caacgagtcgcgcagaatcttccacatcacatgctgcattcgctgtcgcaagtggcgaat
cagacaccgcatcattatccgccacataccccggggacggccggcgccgccggttacggc
ggagtgcacacgtatccgaatacaccatacacgccgtccggccaaaccccattcatgacc
ccataccaaacgcctcatcacacaccgcatcatggccagcctactcccagatacggccaa
caaacgccaagccatcatcagggacccttcgtgcatccgccaccaccttcgatgacaccc
ggtcatcacagatccgctcaatcgcacagacctacgccacccttatccactccctccggt
gatccaacagactggaagaaagcggccgaagcgtgggcacgtctaaaaagtaatcctcga
gtctctggatcaacacccagatacgaggaatccaggaagaccccacgtagctacgaggaa
tcggttggcagaacaacaccctccggaaggagcagaccttcatctacgcgaactccttca
tataaatccccgcgaggtaccccacatacaaattctagtccacgaagtatgtccctcagc
ggagacggtactcccctatatgatgaaagctaa
DBGET
integrated database retrieval system
