Formica exsecta (narrow-headed ant): 115245181
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Entry
115245181 CDS
T07422
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03015
mRNA surveillance pathway
fex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115245181
09123 Folding, sorting and degradation
03018 RNA degradation
115245181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115245181
03041 Spliceosome [BR:
fex03041
]
115245181
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115245181
mRNA cycle factors
Stress granule specific factors
115245181
Spliceosome [BR:
fex03041
]
Complex C
Other components
Complex C specific factors
115245181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_10
RRM_occluded
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
115245181
NCBI-ProteinID:
XP_029679205
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFE
DPDAAEQAVLELNGKEISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIV
GSKPLYVALAQRKEDRKAHLASQYMQRMANVRMQQMGQIFQPGNAGSYFVPTLPQPQRFY
GPAQMAQIRATPRWPAQPNQVRPNAQTGNSGFASMQSAPFRAAPRAPAAQAGALRNSMSA
RPITGQQAVGGANMQSRSMAGPAVGVSPGQSRPPNYKYTANMRNPPQTAMALPAPSGPSV
QQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPSLTGKITGMLLEIDNSEL
LHMLEHNESLKAKVEEAVAVLQAHQAKQAVAPKKE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccggagcgcccaattacccgatggcctcgctctacgtgggcgacctgcatacc
gacatcaccgaggcgatgctgttcgaaaagttctcgtcggcaggtcctgtactatcgata
cgcgtatgccgcgacatgatcacccgtcgctcgctcggctacgcatatgtcaactttcag
caaccggctgacgccgaacgcgccctcgatactatgaactttgacatgataaaggggcgg
cctattcgaatcatgtggtcccagcgtgatccctccctacgtaaatcgggcgtcggaaat
gtattcataaagaatttagacaaaaacatagacaataaagcaatgtatgatacattctcc
gctttcggtaacatactaagctgcaaggtcgcgcaggacgagtcgggcgcctctaaagga
tacggtttcgtccacttcgagactgaggaggcggccaacaagtcgatagacaaagtcaac
ggcatgttgttgaacggcaaaaaggtgtacgtcggtaaatttatcccacgcaaggaacgc
gaaaaggaattgggcgagaaggccaagctattcacgaatgtctacgtgaagaacttcggt
gaggacatgacggacgacaaactcaaagaaatgttcgagaaatacgggaccattaccagt
cataaagtgatgagcaaggacgatggcaaatcgcgcggctttggattcgtcgcgttcgag
gacccggacgcggctgagcaggcggtgctcgagctgaacggcaaggagatctctgagggc
aagtgcatgtacgttggccgcgcccagaagaaggctgagcgtcagcaggagctcaaacga
aagttcgagcaactgaagatcgagcgattgaatcgctaccagggtgtaaacctctacgtg
aagaatctggacgatacgatcgacgacgagcgtctgcgcaaggaatttacgccgtttggc
acgattacatctgcgaaggtaatgatggaggagggtcgtagtaagggtttcggcttcgtg
tgtttctcgcagccggaggaggccaccaaggctgtcacagagatgaacggaagaattgtg
ggctcgaaaccgctctatgtcgctctggcgcaacggaaggaggatcgtaaggcgcatctc
gcctctcaatacatgcaacgcatggcgaacgtacgcatgcaacaaatgggccagatattc
cagcctggtaatgccggcagttacttcgttcccacattgccgcaaccgcagcgcttctac
ggacctgctcagatggctcagatccgcgccactccgcgctggccagcgcaaccgaatcaa
gtacgaccgaacgcgcagaccggaaactccggattcgcatccatgcaatccgcacctttc
cgagctgcgccgcgcgcccctgccgcacaggctggcgccttgcgtaacagcatgtccgcc
agacctatcacaggtcaacaagcagtcggtggtgccaacatgcagagccgttccatggcc
gggcccgctgtcggggtttcgcccggtcagagccgtccgccgaactacaagtacaccgcg
aacatgcgcaacccgccgcaaacggctatggcgctacctgcaccgagcggcccctcggta
cagcaggccgtacatatccaaggccaggagccgctcaccgcgtcgatgttggcagcggcg
ccgccgcaggagcaaaagcagatgctgggcgagcgattgttcccgctcattcaatgcatg
tatccgtcgctgaccggcaagatcaccggtatgctgttggagatcgataacagcgagttg
cttcatatgctggagcacaacgaatccttgaaagctaaggtcgaagaggccgtggccgtg
ttacaggctcatcaagccaaacaagctgttgcaccgaaaaaggaataa
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