KEGG   Formica exsecta (narrow-headed ant): 115245447
Entry
115245447         CDS       T07422                                 
Name
(RefSeq) THO complex subunit 6-like
  KO
K13175  THO complex subunit 6
Organism
fex  Formica exsecta (narrow-headed ant)
Pathway
fex03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:fex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115245447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fex03019]
    115245447
   03041 Spliceosome [BR:fex03041]
    115245447
Messenger RNA biogenesis [BR:fex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     115245447
Spliceosome [BR:fex03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    115245447
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_TEP1_2nd WDR55 NBCH_WD40 Beta-prop_EML_2 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st WD40_like EIF3I Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_RIG_2nd PQQ Beta-prop_DCAF12 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_LRRK2 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 115245447
NCBI-ProteinID: XP_029679617
LinkDB
Position
Unknown
AA seq 206 aa
MAYSKANHLLYAGCGDNNIYIINLDDGRILRSMQGHTDYIHCLAIMDNQLASCSEDGSVR
LWDLRKKENTSILTPHLVDKVARPRLGKWIGAVDFTEDWLLCGGGPSLSLWHMRTMEAAT
IFDLADQGIHVAEIYEERVIAGGAAAHVYHMTYQGEILAKVPTSSLTVYSIVHQETPHKL
LCAAGSSNCIDISTNFNYREMMLKFA
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcatactcaaaagcaaatcatttactgtacgctggttgtggcgataataacatatat
attataaacttggatgacggaagaattttgagaagcatgcaaggccacactgattatata
cactgccttgctataatggataatcagcttgcatcctgcagtgaggatggttctgtgaga
ttatgggatttgcgtaagaaggagaatactagcatattaacgccccatttagtagataaa
gttgctcgaccgcgacttggaaaatggatcggtgctgttgattttacagaagattggttg
ctatgtggcggtgggcctagtctatcgttatggcatatgcgaacgatggaggcagcgaca
atttttgatttggctgatcaagggatacatgtggcggagatctacgaggaacgcgtgatt
gccggtggtgcggccgctcatgtttatcacatgacttaccagggtgaaatcctggccaaa
gtaccaacctcgagtctcactgtatatagtatagtacatcaagaaacaccacataagttg
ctctgtgcagctggttcttcgaattgtatcgatatcagtacgaatttcaattatcgcgaa
atgatgcttaaatttgcgtaa

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