Formica exsecta (narrow-headed ant): 115245453
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Entry
115245453 CDS
T07422
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115245453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115245453
03012 Translation factors [BR:
fex03012
]
115245453
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115245453
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115245453
Translation factors [BR:
fex03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115245453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_N
ResIII
AAA_22
nSTAND3
NPHP3_N
ATPase
NACHT
AAA_14
AAA_19
PhoH
NB-ARC
AAA_7
AAA_16
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
115245453
NCBI-ProteinID:
XP_029679627
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MSRRYGSRGMSNSFARRNREEQQMQSSASGHGGSYSQSRRPPPGLKGKEIGLFYRNLNRE
KKKKKSPVFRLLPHVEERIKTILNNSKSFRSLIFDERSNSEYDDDDKYHHIHDSQFKRKF
LEIINGDIEHNLAKAISMESKLQRNSDVDRILLNEYKDKQIQNDYQNMLKFRLKLPAYRK
KSEILQLIKDNQVVVISGETGCGKTTQVAQFILDDQLEAGNGSITRIVCTQPRRISAISI
AERVAAERAERLGKSVGYQIRLEKIPTREQGSILFCTTGILLQIMKTDPALKDFSHVILD
EIHERTTESDFIITLLKKIIPKRTDLKILLMSATLNSERFSKYYNECPMIHIPGFTYPVQ
EFYLEDVLSLTQFKFPEALEPTDYRRYLKRYKEQQHKKDEFLDIIQPYIRQLRTEMKYGE
HVFKQLRNPNSENLSLELIEKLVRYICNTKGPGAILIFLPGMMDISQLNRMMLDSGCYPP
NKYIIYPLHSRMPTIDQKLIFKEPPDDIRKIIIATSIAETSITIEDVVYVIDCGKTKLGR
FDVKNNIQTLEPEWVSLANAKQRRGRAGRVKSGECYHLYCKVREMTFDQYPLPEMLRTRL
EEVILQIKILQLGKAKEFLASVMDPPDLKAIDLSLNLLRTLNALDKEEHLTPLGYHLAHL
PLDPRTEALRRFEVARRRGNAGQFCREYFLSFNTLKLLSEMKTQFAQYLYEMKFLDNDNP
GDRNANRNSNNIALIKAIVCAGLYPNIAVIRKITKNGIVGWTPEDGSVRTHPSSVNCKAS
NFSSPYLTYFTKKRSTAIYLHDTTCISVPILLFTGPNMLIRREKGKCVISNFNFSENIIC
EPQTVEMIQELQRALNSLFEYKITHPATVLWSTCEGQILNAIIELISQKDQEGDEDFTYC
SSD
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccgatacggttccagaggaatgtcaaattcctttgcacgacgcaatagagaa
gaacaacaaatgcagtcatctgcatctggacatggaggatcttactcacaatcacgaaga
cctcctcctggacttaaaggaaaggaaataggactattttatagaaacttaaacagagag
aaaaaaaagaagaagtctccagttttcagattattacctcatgtagaagaaagaattaaa
actattttaaataattctaagagctttcgcagtttaatttttgacgaaaggtctaactct
gaatatgatgacgatgacaagtatcatcatattcatgattcccaatttaaaagaaagttt
ttagaaattataaatggtgatatagaacacaatcttgccaaggctattagtatggaatca
aaattgcagagaaatagtgatgtggacagaatattactaaatgaatataaagataaacaa
attcaaaatgattaccagaatatgttaaaatttcgattaaagttaccagcgtatcgtaag
aaatcagaaatattacaattgattaaagataatcaagttgttgtcattagtggagaaact
ggatgtggcaaaaccacacaggtagcgcaatttatattggatgatcaattagaagctgga
aacggtagtattactcgaatagtttgcacgcagcctaggaggatttcagctatttccatt
gctgaacgtgtagctgcggaaagagcggaaaggcttgggaaatccgtgggctatcagata
cgactcgaaaaaattccaacgcgggagcaaggaagtatattgttttgcacaactggtata
ttactacagattatgaagactgatccagcattaaaagacttttctcacgtgatattagat
gaaattcatgaacgtaccacggaaagtgatttcattattacattattaaaaaaaattatt
ccaaaaagaacagatttaaaaattctcttgatgagtgcaacattaaattctgaacgtttt
tcgaaatattataatgaatgtccaatgatacatataccaggattcacttatccagttcaa
gaattttatctggaggatgttttgtcacttacgcaatttaaatttcccgaagcattagaa
cctacagattacagaagatatcttaaaagatataaagagcaacaacataagaaagacgaa
tttttagatataatacaaccttacattagacaacttagaactgagatgaaatatggagaa
catgtttttaaacaattacggaatccaaatagtgaaaatctttcattggaacttatagaa
aagttagttaggtatatctgtaatacaaaaggtcctggagctattcttatttttctacct
ggcatgatggatatatcacaattaaatagaatgatgttagattctggatgttatccaccc
aacaaatacattatctatcctcttcattcacgcatgccgacgattgatcagaaacttata
ttcaaagaaccgcctgatgatattcgtaaaataatcattgcaacttccatcgctgagaca
tcaataactatagaagatgtagtgtacgtaatagattgtgggaaaacaaagcttggaaga
ttcgatgtaaaaaataacattcagactttagagcctgaatgggtatctttagctaatgcc
aaacaaagacgcggtagggccggcagggttaaaagtggggaatgttatcacttgtattgc
aaagttcgagaaatgacatttgatcaatatccattgccagagatgttgagaacacgctta
gaagaggtgattttgcaaataaaaatcctgcaattaggaaaagccaaagagttcctagct
agcgtcatggatccgccagatttaaaagccattgatttgtctctgaatttacttagaaca
cttaatgctctagacaaagaagagcatttgactcctttgggttatcatttggcacacctg
ccgcttgatcctagaacagaagctctaagaagattcgaagttgcgcgccgaagaggaaat
gctggacaattctgccgagaatactttctctctttcaacacattgaaacttctctccgaa
atgaaaactcaatttgcacagtatttatatgagatgaaatttttggataacgataatccg
ggcgatagaaacgctaatagaaattcaaataacatagcattgataaaagctattgtttgt
gcgggattatatcctaacattgctgttataaggaaaattactaaaaatggaatagttggc
tggacaccagaagatggaagtgtacgtacgcatccgtcgagcgtaaattgcaaagcttcc
aacttttctagtccatatttgacatattttacaaagaaacgttctactgctatatattta
catgatactacttgtataagtgttccaattttattatttactggaccaaatatgttgata
agacgagaaaagggaaaatgcgtaattagtaattttaatttttctgaaaatattatttgt
gaaccacaaactgtggaaatgatacaggaacttcaacgcgccctgaattctttatttgaa
tataagattacgcatccagcaacagtactttggtcaacatgtgaaggacaaatattaaat
gcgatcattgaattaatatctcaaaaggatcaagaaggtgacgaagattttacttattgt
agttccgattga
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