Formica exsecta (narrow-headed ant): 115245514
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Entry
115245514 CDS
T07422
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fex03009
]
115245514
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115245514
Ribosome biogenesis [BR:
fex03009
]
Eukaryotic type
90S particles
Helicases
115245514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
ATPase
AAA_23
HA2_N
Helicase_RecD
AAA_29
Motif
Other DBs
NCBI-GeneID:
115245514
NCBI-ProteinID:
XP_029679744
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MEKRKKIYNLKSETVANTKVDNSTMKEIVIDIEHRADDYDSCNALVLSTKKTKTKNIHKK
VKTQLLSKKRRKQLEKVVEKKKKKLQRATLLEDLAKYQASSHELQQYTSLTSLQNKGLKR
HFRQLEMPVSKLKCMKHEIERSDTIETTFCANSIKGSKKKRFAILDHAKQDKTTFDPNMV
GFESSDSSNENDYNNENKAYVSDNTAISTEKEKKNENFLEDGQKKTVPAKSQKSEKPIGK
PVVSKACISTIFVPVNRKQEIQATRLKLPIVAEEQVIVETINENPITIITGETGSGKTTQ
VPQFLYEAGYAQNKLIGITEPRRVAAMSMSKRVAEEMNLTEKQVSYLIRFEGNVTEETKI
KYMTDGVLLKEIQSDFLLKKYSVIILDEAHERSVYTDILIGLLSRIVPLRNKRNDPLKLI
IMSATLRVEEFVENMKLFKVKPPVITVEARQFPVTIHFNRRTNENYVNEALRKTVKIHTC
LPEGGILIFLTGQQEVHTIVRKLRKLFPLKKNKIKLVDSEKSETFLEEVTSNEHSNHDDS
DDNFDTKKALCHNKQRKKKPIILPTINLDDYSTTLSLTDDTHEDLINVQDDEDNLDEDED
EDEFIDFKLLTNTQPLWILPLYSLLPSHKQARVFEPPPEGCRLCVVSTNVAETSLTIPNI
RYVIDSGRCKTRLYDKVTGVSTYHICYTSKAAAKQRAGRAGRTRPGHCYRLYSSAVYNDQ
FEEYSQSEIRKKPVDDLLLQMKAMNIDKVVNFPFPTPPDIVQLKFAEKRLTILGALQSFP
MKQELYCAKVTLLGRSIATFPVIPRYGKMLALSHQHNLLTYTICMVAALSVQEVLIEALG
IDSSAKHKWLSMRRCWAGTGNSLLLGDPMVLIKVIGFAEYAGSKGRLLPFCEKTGLRHKA
VIEIRKLRQQLTNEINLNIPDLNLTINPKMSPPTDMKAKLLRQIILAGMADQIAKKVSSD
EIKEDQDKIKWKHAYRTSEMEEPIFMHSSCVLRKTNPEWVVYQELYETNKIYMRNVTAIE
PEWLPKFAPTLCNLSEPLIDPPPRYDRETGKIICRVCGTFGSAGWKLPPMDIEHPLTVDG
IKWFAFFFLEGQICPKLKRFVPSLLTTPGSITKSWAKLIPRTQAIVQALLSHEIMSKDKL
LQIWSSDKKFLLAPYQKWLPESAHMEVAFLWPPL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagaaagaagatttataatttgaaatcggagactgtcgcaaatacaaaagtc
gataactccactatgaaggagattgtaatagatattgagcatcgtgctgatgattatgac
agttgtaatgcacttgtcttatctacaaagaaaacaaaaacaaaaaacatacataaaaaa
gtaaagactcagctgttatcaaaaaaacgcaggaaacaattggaaaaagtggtagagaaa
aaaaagaagaaactacagagagcaacattgttagaagatttggcaaaatatcaagcatct
tcacatgaattacaacaatatacaagtttaacatctttgcaaaacaaaggtttaaaacgc
cactttcgacaattagagatgcctgtttcaaaattaaaatgtatgaaacatgaaatagag
agaagtgatacaatagagacaactttctgtgcaaattctatcaaaggcagcaagaagaaa
agattcgctattttggatcatgcaaaacaagacaaaactacatttgatccaaatatggtt
ggatttgaatctagtgatagcagcaatgaaaatgattataacaatgaaaataaagcatat
gtttctgataatactgctatttctacggaaaaggaaaaaaaaaatgagaattttttagaa
gatgggcaaaagaaaacagtcccagctaaatctcagaaatctgaaaaaccaataggaaaa
cctgttgtctctaaagcttgtatatctactatttttgtgcctgtaaatagaaagcaagag
atacaagcaactagattgaaactacccattgttgcggaagaacaagtaatagttgaaaca
ataaatgaaaatccaataaccataattactggagaaacaggaagtggcaaaacaacacaa
gttccacaatttttatatgaagctggatatgctcaaaataaattaattggaataaccgaa
ccaagaagagtagcagcaatgtcaatgagcaaacgagtagctgaagaaatgaatcttacc
gaaaaacaagtttcatacctaattcgttttgagggaaatgttacagaagaaacaaaaatc
aaatatatgactgatggtgttttgctgaaggaaattcaaagtgactttttattaaaaaaa
tattctgttattatactcgatgaggcacacgaacgcagcgtgtacaccgatattctgatc
ggtctattgtcaaggattgttccgcttcgtaataaacgcaacgatcctttgaagttgata
attatgtcggctacattgcgcgtggaggaatttgtagagaacatgaagctgtttaaagtg
aagccgccggttattacagttgaagcacgacaatttcctgtaacaatacatttcaataga
agaacaaacgagaattatgtcaatgaagcattgcgtaaaacagtaaaaatacatacttgc
cttccagaaggtggtatattaatttttttaacaggccagcaagaagtgcatacgatcgtg
cgtaaattacgcaaattatttccattaaagaaaaataaaattaaattggtagattctgaa
aaaagtgaaacatttttggaagaagtaacaagtaatgaacatagtaatcatgatgattcc
gatgataattttgataccaaaaaagcattatgccataataaacagagaaaaaaaaagccg
attatacttccgactattaatctcgatgattattccacaactctatctcttactgacgac
acacatgaagatttaatcaatgtacaggatgacgaggataatttagacgaggatgaagat
gaggatgaatttattgatttcaagttattgacaaatacacaaccattatggattctacct
ctttattctcttttacctagtcataaacaagctagggtgtttgaaccaccgccagaagga
tgtcgtctatgcgtagtatccaccaatgttgcagaaacatcgctgacgattcccaatatt
agatatgttatagatagcgggcgttgtaaaacaagactatacgataaagtgactggtgta
agcacatatcatatttgctatacgagtaaagcagcagccaagcaacgcgctggcagagcc
ggtagaactcggcctggtcattgctacagattgtactcatcagctgtgtacaatgaccaa
ttcgaggaatatagtcaatcagaaattcgtaaaaagccagtggatgatttattattgcaa
atgaaggcaatgaatatagataaagttgtgaattttccgtttcccacgccaccagatatc
gtacaactaaagttcgcggaaaaacgacttacaatacttggagcattacaatcatttcca
atgaaacaagaattatattgcgcaaaagtgacattgcttggacgtagtattgccacattt
ccggttatcccacgttatggcaaaatgttggcactgtcgcatcaacataacttattaaca
tacacaatatgcatggtagcagctcttagtgttcaagaagtgctgatagaggcacttggc
atagatagttcggctaaacataaatggctgtcaatgcgtcgctgctgggctggcacaggc
aatagtttacttcttggcgatccaatggttctgataaaagttatcggatttgccgagtat
gcaggatctaaaggaagattgttgcccttctgtgagaaaactggcttaagacacaaagct
gtgattgagattagaaaacttaggcagcaactcaccaatgaaattaatttaaatataccg
gacttgaatctaaccattaatccaaaaatgtcaccaccaactgacatgaaagctaagtta
cttcgtcagataattctcgcgggtatggcggatcaaattgcaaaaaaagtttcatctgac
gagataaaagaagatcaggacaagatcaagtggaagcacgcttatagaacatcagaaatg
gaggagcctatattcatgcactcctcatgcgttctacggaagaccaatccggaatgggtt
gtttatcaagagctttatgaaacaaataagatttacatgcgaaatgtcacagcaatagag
cctgaatggttaccaaaattcgcgcctacattgtgcaatctcagcgaaccattgattgat
ccaccaccaaggtatgatcgagaaaccggaaaaatcatctgccgtgtatgcggcacattc
ggaagcgccgggtggaaacttccaccgatggatatagagcatccattgacggtggatggt
atcaagtggttcgcatttttcttcttagagggtcaaatatgccctaaattgaaacgattt
gtgccatcattactgacaacaccaggcagcatcactaagtcttgggccaagctaatacca
cgcactcaagcgatagtacaagcgctattatcgcacgaaatcatgtccaaagataaactg
ttgcaaatatggagttcagataagaaatttttgctagcaccctatcagaaatggctgccg
gaatccgcgcatatggaagtagcttttttatggccacctttataa
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