Formica exsecta (narrow-headed ant): 115245982
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Entry
115245982 CDS
T07422
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03030
DNA replication
fex03420
Nucleotide excision repair
fex03430
Mismatch repair
fex03440
Homologous recombination
fex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115245982
03420 Nucleotide excision repair
115245982
03430 Mismatch repair
115245982
03440 Homologous recombination
115245982
03460 Fanconi anemia pathway
115245982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fex03000
]
115245982
03032 DNA replication proteins [BR:
fex03032
]
115245982
03400 DNA repair and recombination proteins [BR:
fex03400
]
115245982
Transcription factors [BR:
fex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115245982
DNA replication proteins [BR:
fex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
115245982
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
115245982
MMR (mismatch excision repair)
115245982
DSBR (double strand breaks repair)
HR (homologous recombination)
115245982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
POT1
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
115245982
NCBI-ProteinID:
XP_029680382
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MYNLTEGALDKIMNGIDVKKPVLQILGYKKIPRSTNTDDRYRLLLSDGHRLNSFTMLITQ
LNNLITNNTLTEYSICKILNYALTSVNNNGKERCIMLIVDIEVLVPGSDVGYKIGNPIKT
DDKSQPECLNTSNTSTSTSYQTNNNDTTKKKILDHHTSSDISTIPIAALSPYQNRWVIKA
RVTNKSDIRTWSNSRGEGKLFFMNLIDESGEIRCTAFKNQCDRFYDLIEAGNVYYISRCK
LKTANKQYSTLKNDYEMTMSDDTEILPCYENSDKIPMLQFNFCPISWIENKEQNDMIDVL
GVVTTFNDVQHVVQRTTGRELVKRDVNIMDDSGAMICVTLWEKQAENFNGSNNPILAIKG
ARVGEFNGGKNLSLINSSVLEKDPDISEAHNLRRWYTATSHLENVKSLSKPNAGDFNVPL
YTFQEATETRLGERLNLADSYKVVATINLIRMENSIYKACPIDICKKKLIDQSTGMFRCE
KCNKDYPNFVYRLLASMNIADSTGNRWIVAFNEDAEKILGMSAQELGELKEKDNDAYMQK
LNEANFKRFTFTLRVKSEVFQDEMRMKHTCASIVPLNYKTHLTHLIDKVSKLIHIKKLES
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtataatctaactgaaggagcattagataaaatcatgaatggtatagacgtcaagaaa
ccggtgcttcaaatattgggttataaaaaaataccaagatccactaatacagatgatcga
tatagattacttctatctgatggacatagattaaattcatttacaatgttgattactcag
ttaaataacttgataacaaataatactttgactgaatattcaatctgcaaaatattaaat
tatgccttaacttcagttaacaataatggaaaggaaagatgtataatgctaatagttgat
attgaggtgctagttcctggcagtgatgttggctacaaaataggcaacccaattaaaact
gatgacaaatcacagcctgaatgtctaaatacatctaatacatctacatctacatcttac
caaactaataataatgatacaacaaaaaaaaaaattttagatcatcatacctcttctgat
atatcaactataccaatcgcagcgttaagtccttaccaaaataggtgggtgatcaaggct
cgagtgacaaataaatctgacatcaggacgtggagcaattctcgtggagaaggtaaattg
ttcttcatgaatctaatcgatgaaagcggtgaaattcgatgtactgcgttcaaaaatcaa
tgcgatagattctacgacttgatagaagctggtaatgtgtattatatttcgcgatgtaaa
ttgaaaacggcaaataaacagtacagcacattgaaaaatgattatgagatgacaatgagt
gatgatacagagattttgccatgttatgaaaacagtgataaaataccgatgctgcaattt
aatttttgtccaataagttggatagaaaacaaggagcaaaatgatatgattgatgtcttg
ggcgttgttacaacatttaacgatgtgcaacatgttgtacagcgaactactggtagagaa
cttgtcaagagagacgtcaatatcatggacgatagtggtgcgatgatatgtgtcacatta
tgggaaaaacaagctgaaaactttaatggttctaataatccaatcctagctatcaaggga
gcgcgtgttggcgaatttaatggcggaaaaaatttgtctctcataaattcatccgtactt
gaaaaagatccggacatatcagaagcacataatttgcgcagatggtacactgcaacaagt
catttggagaatgttaaatcgttgtctaaaccaaatgcaggcgatttcaacgtgccattg
tacactttccaggaagcgactgaaacacgattgggagaaagattaaatcttgcagactca
tataaagttgtggcgactattaatttaattcgcatggaaaattctatctataaggcatgt
cccatagatatttgcaaaaagaagctgattgatcaatctaccggaatgtttagatgcgag
aagtgtaataaagattatccgaatttcgtttatcgcttgctggcaagtatgaacatagca
gactcaacaggcaatcgctggatagttgctttcaatgaagatgccgaaaagatattgggc
atgtcggcacaagaattgggagaattgaaagaaaaggataatgatgcttatatgcagaaa
ttaaacgaggcgaatttcaagaggttcacattcactttgagggtaaaatcggaagttttt
caggatgagatgagaatgaaacacacttgtgcatcgattgtaccattaaattataaaact
catttgacacatttgatagataaagtttccaagctgatacatattaagaaattggaatct
gactaa
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