Formica exsecta (narrow-headed ant): 115246075
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Entry
115246075 CDS
T07422
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115246075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fex03400
]
115246075
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115246075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
115246075
NCBI-ProteinID:
XP_029680522
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MPKVNTILNYFTSPKNVKKPEAKKEQVENPRTPNTEQRKKELIGNNEKENQNTNDRKRLH
KKNDDKEENEPIKIKRRRLIIPDDDSDEDTENEFKPDSKCEESESISEKDIEHESSTETE
EDTPKKKRKRSSVKSKPEQANYSSNKADKKELKQSAQIQSQTVNNGLAAAHVWPHLKLDF
LQPDKIRDIQRRTLKDPNYDPRTLYVPIDFLNNQTPAMRQWWELKSKHFNCVLFFKVGKF
YELYHMDAVISVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTENPEMM
AARCSKMTKSTKFDKVVKREICQISTRGTRVYTPLDVEASTPNSNYLLSLVERCDPGQTT
SSFGICFIDTTIGEFNLSQFDDDYCNSRLLTLLAHHPPVHVIYERGNLSRKTLQLISNTL
PAALKESLQREAQFWSATTTLKNLHEGDYFKKEKDSNFAWPEGLKSYLNEGDSLGLTPAN
NKELAVHALGGCVYLLKEFLLEQQLLAQSCFNTYIPPDFSAANNRAGLNYTNTMVIDAVT
IKNLKLFGENSLNSTLDRCCTAFGKRLLREWICRPSCRKDIIMKRQEAVQELVDRIDMIQ
SARAILSTLPDLERLLSKIHAQGNAARMKNHPDGRAIMFEGPTYSKRIIVEFTTTLAKFE
EVLKFIELFNDFKSNLISHCTQYEPDGDFPHLREILDYFKTAFDHEEAKKQGCIVPKKGV
DVEYDLVLDELAKNKKDIDKYLEKQKRHFDANITFFGTDKKRYQIEIPESRVKKVGPGYE
LQSQRKGFKRYYTAEAKELLARQINTEEHRDKVLKDLNRRIFAQFSEKYDMWHAAIYKVA
TMDVLISLVDYARNGDMCIPEIHDGLDGEIFIKIKDGKHPCIVSDNFIPNDTLLACDDAA
SFMILTGPNMGGKSTLMRQVGLITIMAQIGSYVPASSCCITLVDRIFTRLGANDDILTGQ
STFLVELNETATMLQHATPYSLVLLDELGRGTSTYDGTAIAASVVDALTKLKCRTLFSTH
YHSLVEDYKTNKEVTLAHMACMVEMGEEENVSQETVTFLYKLNEGACPKSYGFNAARLAG
IPSIITKKAHEIASKIEQETNDKHIFIALCKANSAQMRNFITAL
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagtaaatacgatacttaattatttcacgtctccaaaaaatgtcaaaaagccg
gaggcgaagaaagagcaagtagaaaatccgcgaacacccaacacagaacaaaggaaaaaa
gagcttattggaaataatgaaaaagaaaatcaaaatactaatgatagaaaaagattacat
aaaaagaatgatgataaggaagaaaatgagcctataaaaattaaaagaagacgcctaatt
attcctgatgatgattctgatgaagacactgaaaatgaattcaagccagattccaaatgt
gaagaatctgagtcaatttcggaaaaagacatagagcatgaatcttcaacagaaacggaa
gaagatacaccaaaaaaaaaaagaaagagatccagtgttaaatccaagccagaacaagca
aattattcatctaataaagcagataaaaaagaattgaaacagtctgcacaaattcaaagt
cagacagtgaataatggacttgctgctgcacatgtttggcctcacttgaaattagatttt
ctgcagccagacaaaataagggatatacagaggagaacattaaaggatccaaattatgat
cctagaacactttatgtaccaattgatttcttaaacaatcaaactcctgcaatgaggcag
tggtgggagttaaaaagtaagcattttaattgtgtacttttcttcaaagtcggcaaattc
tacgagttgtatcacatggatgcagttatcagtgttaatgagcttagcctcacatatatg
cgaggtgaattcgcacactctggatttcccgaaatcggctatggtcgttattcggcaagc
ctcatagaaagaggttacaaagttgcacgagtcgagcaaacagaaaacccagagatgatg
gcagcgcgctgcagcaaaatgactaagtcaacaaaattcgataaagttgtaaagcgagaa
atttgtcaaatcagtacaagaggcactagagtgtatactccattagatgtggaagcatct
acaccaaactccaattatctgttatctttagtagaaagatgcgatcctggtcagacaacc
agctccttcggaatatgctttatagacacaacaataggcgaatttaatctcagtcaattt
gacgatgactattgcaattccagattgttgactctgctggctcatcatccaccggtgcat
gtaatatacgaacgtggtaatctatcgcgaaaaactttgcagcttataagtaacactcta
ccagcagcgctaaaagaatcgctacaacgcgaagcacaattctggtccgctacaactaca
ttaaaaaatcttcatgaaggcgattatttcaagaaggagaaagattccaactttgcatgg
cctgaaggtttaaaatcatatcttaatgaaggagatagcttgggtttaacaccagccaat
aataaagaattagcagtacatgcattaggaggatgtgtgtacttattaaaagagtttctg
ctcgaacagcaactattggcacaaagttgctttaatacttacattccaccggatttctca
gctgcaaacaatcgcgcaggtctcaattacacaaataccatggtgatagatgctgttaca
ataaaaaatttaaaactttttggagagaattcgctcaatagtactttggatcgttgttgt
actgcatttggaaaaagattgttgcgtgaatggatctgtaggccatcttgtcgtaaagac
attataatgaaacgccaggaagctgtgcaggaattggtagatcgaatagacatgatacaa
tcagctcgcgcaattttgtcaactctaccggatcttgaaagattattaagcaaaatacat
gctcagggaaatgcagctagaatgaaaaatcatcctgatggcagagcaataatgttcgaa
ggcccaacgtattcgaagaggataattgtagagtttaccacgacactcgctaaattcgaa
gaagttttgaaatttattgagctgtttaatgattttaaaagtaacctgataagccactgt
actcaatatgaaccagatggtgatttccctcatttaagggaaatattagattactttaag
accgcatttgatcatgaagaagccaaaaagcaaggttgcattgttcctaaaaaaggagta
gatgtcgaatatgatttagtcttggatgaacttgcgaagaacaaaaaagatatagacaaa
tatttagaaaaacaaaaacggcactttgatgcaaacataacattttttggaacagataag
aaacgttatcaaatcgagattcctgagtcgcgagttaagaaagttggtcccgggtatgaa
ctgcagtcacaaagaaaaggttttaaacgttattatactgccgaggcaaaggaactttta
gcaagacagataaatacagaagaacatagagataaagtactgaaggatcttaacaggaga
atatttgcgcagtttagtgaaaagtatgatatgtggcatgcagccatttacaaagtggca
accatggacgtgctcatttctctcgtggattacgctcgaaacggcgatatgtgtataccg
gagattcatgacggattagatggtgagatcttcatcaagataaaagatggaaaacatcct
tgtattgtatctgataactttattcccaatgacaccttattggcatgtgatgatgctgcc
tcctttatgattctgacaggaccaaacatgggaggcaagtcaactctcatgcgtcaagtc
ggcttaatcacgatcatggcgcaaataggcagctacgttccagctagttcatgttgcata
acattggtggatcgtattttcacacgtttgggtgctaatgatgatattctgactggtcag
agcacattcttggttgaattgaacgaaactgccacgatgttacaacatgctacgccctat
tcgttggttcttctcgacgaattgggacgtggcacgtcaacctatgacggcacggcaata
gcggcttcggttgtcgatgcgttgactaagttaaagtgtcgcacattattctcgactcat
tatcattctttagttgaggattacaaaaccaataaagaggttacattagcccatatggca
tgcatggtagaaatgggcgaagaagaaaacgtatcacaagagacggtaacgttcttatac
aagcttaatgaaggagcttgtccgaaatcttatggattcaatgccgctcgactagcaggt
ataccgtcaattatcacaaagaaagcgcatgagatagccagcaagatagaacaagaaact
aatgacaaacacattttcattgctctttgtaaagccaacagtgcccaaatgaggaatttt
attactgctctttaa
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