Flavobacterium faecale: FFWV33_01915
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Entry
FFWV33_01915 CDS
T05515
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ffa
Flavobacterium faecale
Brite
KEGG Orthology (KO) [BR:
ffa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffa03032
]
FFWV33_01915
03036 Chromosome and associated proteins [BR:
ffa03036
]
FFWV33_01915
03400 DNA repair and recombination proteins [BR:
ffa03400
]
FFWV33_01915
DNA replication proteins [BR:
ffa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FFWV33_01915
Chromosome and associated proteins [BR:
ffa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FFWV33_01915
DNA repair and recombination proteins [BR:
ffa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FFWV33_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AWG20368
UniProt:
A0A2S1L9K4
LinkDB
All DBs
Position
complement(422562..422852)
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AA seq
96 aa
AA seq
DB search
MTKADIVAKISEKLGLEKGDVQATVETFMEEVKNSLETGDNVYLRGFGSFIVKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKTNNEAK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcagatatcgtagcaaaaatttcagaaaaactaggtcttgaaaagggtgat
gttcaggcaacagttgaaacttttatggaggaggttaaaaactctttagaaactggtgat
aacgtttatttaagaggttttggaagttttatcgttaaaacgagagctgaaaagacagga
agaaatatttctaagaacactacaatcaaaatccctgcacacaatattccagctttcaaa
cctgcaaaagtttttgtagaaggagtaaaaacaaataacgaagcaaaataa
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