Flavobacterium faecale: FFWV33_02675
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Entry
FFWV33_02675 CDS
T05515
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ffa
Flavobacterium faecale
Pathway
ffa03030
DNA replication
ffa03430
Mismatch repair
ffa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ffa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFWV33_02675
03430 Mismatch repair
FFWV33_02675
03440 Homologous recombination
FFWV33_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffa03032
]
FFWV33_02675
03400 DNA repair and recombination proteins [BR:
ffa03400
]
FFWV33_02675
Enzymes [BR:
ffa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFWV33_02675
DNA replication proteins [BR:
ffa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFWV33_02675
DNA repair and recombination proteins [BR:
ffa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFWV33_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AWG20510
UniProt:
A0A2S1L9R2
LinkDB
All DBs
Position
596710..601245
Genome browser
AA seq
1511 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSANWPRCIQIAWQLHDEMGKLIEHQDYLVQPDGFNIPY
DAERIHGISTELAQHDGVPLADVLEKFNIALGKAKFIVGQNLGFDVNIMGAEFHRLSVES
PMASIPVLDTCTEVTAKLLQLPGGRGGKFKLPTLTELHQYLFNVPFGEAHNATADVEATT
RCFLELIRKEIFTKEELDVPGSYFVDFQNKNPREIQLIGLKHINLKQASDKIRQQFGETT
TQTVSKQELNENKAVLTDVPYAHLHNHTQFSVLQSTIGVADIVKATAKFKMPAVAMTDTA
NMMGAFHFVSAVMNHTKAAKAKNAALIENGEEPTETEIKPIVGLEFNICENHKDKSKKDN
GYQVVFLAKNKNGYHNLAKMASIANIDGFYYVPRIDKKIVEKYKEDIMVLSGNLYGEIPG
KILNLGENQAEEALIWWKEQFGDDFYLEIMRHNQEDENRVNKTLIAFARKHDVKLIATNN
TYYVNKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYYKSGDEMKQLFADLPD
AIINIQEIVDKVEAYSLYRDVLLPKYDIPQEFVDPEDDVDNGVRGENAYLRDLTMVGAKK
RYGEITESIQERLDFELLTISNSGYPGYFLIVQDFIAKAREMDVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVIKKYGANQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPAMMPGKWNLARFLSESEDDVRKALKGPD
EFDLVKELIAIANGDDLAAETIQQAKILEGSMRNTGIHACGVIITPSDITNYVPVTTAKD
SDLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRNGITLDPDTFPIDDVKTY
ELFQRGETVGIFQYESPGMQKYMKELKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGEE
EIKYDLDACEEYLGETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQKEVLDKMK
PKFVKQAAEKGHDAKVLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMA
AVLSNNMNDIKQVSFFMEECKRMGLQVLGPDVNESFYKFTVNEEYAVRFGMGAVKGVGSG
AVATIVEHRKDGRYKSIFDLAKRIDLRAANKKAFENLVLAGGMDCFEDTHRAQYFHDDGD
GITFYEKAIRYGAKFQENENSSQVSLFGEASEVQIAEPVVPPCEDWSTMEKLAKEKEVVG
IYISGHPLDDFKFEMKNFCNVRLEALRNLHLHVSKPLAIAGIVNNVQHKVAKNGKGWGIF
TLEGYDESYEFKIFGEEYLKFRHFFLQNNFVYIKLMVKDGWVNQDTGKKSDPRIAFTEVR
QLQDVLAAFAKKLIIILNITDLQTDFIHHLNQIFQDNKGDHQVTFEIMELERIKKMVEAE
PIVLENEDDFVEEVNDDDDSETATIKTTEMTEVEEIKVVTKLSMPSRRLKINISNELLVE
LEKMQINFKLN
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatattcgataccgaaactactggattaccaaagcgttgggacgcgcccata
accgattcggctaactggccgcgttgtatacaaattgcatggcaattgcacgatgagatg
gggaaacttatcgaacaccaagattatttggtgcagcctgacggattcaacattccgtat
gatgccgagcgtattcacgggatttcgaccgagttggcacagcatgacggggttccgttg
gcggatgttttggaaaaattcaatattgctttgggtaaagccaaattcattgtgggtcag
aatttaggttttgacgtcaatattatgggggctgaatttcaccgactttcagttgaaagt
ccgatggcttcgattccggttttggatacttgtaccgaagttaccgccaaattattgcaa
ttacctggaggtcgtggtggaaaattcaagctaccaaccttaaccgagttgcaccaatat
ttatttaatgttccttttggcgaagcgcacaacgctactgccgatgtggaggcaacgacc
cgttgttttttagaattaattcgaaaagaaattttcaccaaagaagaactggatgttccg
ggttcctactttgttgattttcaaaataaaaatccaagagaaattcagctcattggatta
aaacacatcaacctcaaacaagcttcggataaaattcgtcagcaatttggggaaacaaca
acgcaaaccgtttcaaaacaggaactaaacgagaacaaagcggttttgaccgatgtgccg
tatgcgcatttgcacaatcacacccaattttcggttttacagtcgacaattggagttgcc
gatattgttaaggctactgctaaattcaaaatgccagcggttgcaatgaccgacacggca
aatatgatgggagcttttcactttgtgagtgcggtgatgaaccataccaaagcagctaaa
gccaaaaatgcagctttaattgaaaatggtgaagaacctaccgaaaccgaaatcaaaccg
attgtaggattggagttcaacatttgtgaaaaccataaagataaatccaaaaaagacaat
ggttaccaagtggtctttttagccaaaaacaaaaatgggtatcacaacttggccaaaatg
gcgtctattgccaacattgatggtttttattatgtaccacgtattgacaaaaaaatagtc
gaaaaatacaaagaagacatcatggttttgtctggaaatttatacggagaaattccgggt
aaaattttgaacttaggagaaaaccaagccgaagaagccttgatttggtggaaagagcag
tttggagatgatttttatctcgaaatcatgcgtcacaaccaagaggacgagaaccgtgtc
aataaaactttgattgcttttgctcgaaaacacgatgtcaaattaattgcaaccaacaat
acctattacgtaaataaagaggatgccaatgcacacgatattttattgtgtgtaaaggac
ggagaaaaacaagccacaccaattggtcgtggtcgtggttatcgttatggtttgcccaat
caagaatactattacaaatcaggtgacgaaatgaagcaattgtttgctgatttacctgat
gcaattatcaacatacaagaaattgtagacaaggtcgaggcttactccttgtaccgagat
gtattgctacctaaatatgatattccgcaagaatttgtcgaccccgaagatgatgttgat
aacggggttcgtggagaaaatgcttatttgcgtgacctaaccatggtcggtgcaaaaaaa
cgatatggcgaaattacagaatcgattcaggaacgtcttgattttgaattattaaccatt
tcgaactcaggttatcctggttatttcttgattgtacaagatttcattgccaaggcaaga
gagatggatgtttctgtaggacctgggcgtggatcggctgcgggttctgccgtggcgtat
tgtctcggaattacgaatattgacccaattaaatacgacttgctttttgagcgtttcttg
aatcccgatcgtgtatccatgcccgatattgatatcgattttgatgatgagggtcgtggt
cgcgttatggattatgtaatcaaaaaatacggagccaatcaggtagcacaaattatcact
tatggtaagatggcaaccaaatcggcaattcgtgatacggcgcgtgtactggatttacca
ttattcgaagccgatagaattgcaaaactgattccggccatgatgcctggaaaatggaat
ctagcgcgcttcctttccgaatctgaagatgatgttcgaaaagcattaaaaggtccggac
gaatttgacttagtcaaagaattaatagccattgccaacggtgatgatttggctgccgaa
acgattcagcaagcaaaaatcctcgaaggctcgatgcgtaacacgggtattcatgcgtgt
ggagtgatcatcaccccatcggatattaccaattatgttccggttacaacagcaaaggat
tccgatttatacgtaactcaatttgacaactccgtggccgaaagtgctggactgttgaaa
atggacttcttgggtctaaagacccttaccctaataaaagacaccgttaaactggtcaaa
tatagaaatggaataacgctcgatccagacaccttccctattgatgatgtcaagacgtat
gagctctttcagcgcggagaaacggttggaatcttccaatacgagtcacctggaatgcaa
aaatacatgaaggaattgaagcccactgtttttggggatttaattgccatgaatgccttg
tatcgtccaggacctttagaatatattccttctttcgttcgaagaaaaaatggcgaagaa
gaaattaaatacgatttagatgcctgcgaagaataccttggagaaacttacggaattacc
gtttaccaagagcaggtgatgcttttgtctcaatctttggctggatttaccaaaggtgag
gccgacgttttgcgtaaagcgatgggtaagaaacaaaaagaggttcttgataaaatgaaa
cctaaatttgtaaaacaagcggctgaaaaaggtcatgatgccaaagtattagaaaaaatc
tggaaagactgggaagcctttgcgagttacgcctttaacaagtcgcactccacttgctac
gcttggattgcctaccaaaccgcctacttaaaagcacattatcctgccgaatatatggca
gcggtgctttcgaataacatgaacgatatcaagcaagtttcgtttttcatggaagaatgt
aaacgtatgggactccaagttttgggacccgatgtaaatgagtcgttttataaatttact
gtaaacgaagagtatgcggttcgtttcggaatgggcgctgtcaaaggtgtgggttctggt
gcggttgctaccattgttgaacatagaaaagatggtcgttataaatcgattttcgactta
gcaaaacgaattgatttacgggcagcaaacaaaaaagcatttgaaaacttagtactcgcc
ggaggtatggattgttttgaagacacgcatcgtgcccagtattttcatgatgatggagac
ggaattacattctacgaaaaagccattcgttatggagcaaaatttcaagaaaacgaaaac
tcgtcgcaagtaagtttatttggtgaagcctctgaagttcaaattgccgagcctgttgta
ccgccttgcgaggactggagcaccatggaaaaactagccaaagagaaagaagtggttgga
atttacatctctggacatccgctagatgatttcaaattcgaaatgaaaaacttttgcaat
gttcgactagaagcactccgaaatctgcacctacatgtcagcaagccgctcgctattgca
ggaatcgtgaacaatgtgcaacataaagtagccaaaaacggaaaaggttggggaatattt
actctcgaaggttatgatgaaagttatgagttcaaaatttttggtgaagaatatttgaag
ttccgtcatttctttttgcaaaacaattttgtctacatcaaattgatggtcaaagacggt
tgggtaaaccaagacacgggcaagaaaagtgaccctagaattgcctttacagaagtgcga
caactacaagatgtattggctgcttttgcaaagaaattgatcattattctaaacattacc
gatttacaaactgatttcattcatcatttgaaccaaatattccaagacaacaaaggagat
caccaagtcacatttgaaatcatggaactagaacggatcaaaaaaatggtcgaagcagaa
cctattgttctcgaaaacgaggacgactttgtagaagaagtaaatgacgacgacgatagc
gagacagctaccataaaaactaccgaaatgacagaagtcgaggaaataaaagtagttacc
aaacttagcatgccaagccgtcgactcaaaatcaacatttcaaacgaattattggtcgaa
ttagagaaaatgcagatcaatttcaaactgaattaa
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integrated database retrieval system
