Flavobacterium faecale: FFWV33_06030
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Entry
FFWV33_06030 CDS
T05515
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ffa
Flavobacterium faecale
Brite
KEGG Orthology (KO) [BR:
ffa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ffa03016
]
FFWV33_06030
Enzymes [BR:
ffa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FFWV33_06030
Transfer RNA biogenesis [BR:
ffa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FFWV33_06030
Prokaryotic type
FFWV33_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWG21124
UniProt:
A0A2S1LBN0
LinkDB
All DBs
Position
complement(1372599..1373303)
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AA seq
234 aa
AA seq
DB search
MIALTTEDYLNGQVLLIDKPLTWSSFQAVNKLKYALINKAGLPKKFKIGHAGTLDPLATG
LLIVCTGKFTKRISEIQGQAKEYTGTFFIGATTPSYDLETEVDQEYPKAHIDEALIHETV
KRFLGEIDQVPPIYSAIKKDGVRLYEHARAGETVEIASRKTVIHEFEITRIALPEIDFRV
VCSKGTYIRSLAYDFGKAMQSGSHLTALRRTKIGDYNVINAIDPTFFEENLEKA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgattgcattaactaccgaagattacctcaacggacaagttttattgattgacaaacca
ttgacatggagctcatttcaggcagtgaataaattgaaatatgctttaatcaacaaagca
ggacttccaaaaaaatttaagattggtcatgcaggaacattagatcctttggctacaggc
ttattgatagtatgtacgggtaaattcaccaaaagaatttcggagatacaaggacaagcc
aaagaatatacaggtacgttttttataggcgctaccactccatcctacgacttagaaacg
gaagtggaccaagaatacccaaaagcgcatattgacgaagcattaattcacgagactgtt
aagcgatttttgggcgaaatagatcaagtaccaccaatttactctgcaatcaaaaaagat
ggcgttcgcttatacgaacatgcacgcgcgggtgaaacggtagaaattgcctctagaaaa
accgtgattcatgaatttgaaatcacacgaattgcactacctgaaattgattttagagtt
gtttgcagcaaaggaacgtacattcgctctcttgcgtatgattttggaaaagcaatgcaa
tctggatcgcatttgactgctttgcgaagaacgaagattggcgattacaacgtaattaat
gccattgaccctaccttttttgaagaaaatttagaaaaagcctaa
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