Flavobacterium faecale: FFWV33_07610
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Entry
FFWV33_07610 CDS
T05515
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ffa
Flavobacterium faecale
Pathway
ffa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FFWV33_07610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffa03021
]
FFWV33_07610
03400 DNA repair and recombination proteins [BR:
ffa03400
]
FFWV33_07610
Enzymes [BR:
ffa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FFWV33_07610
Transcription machinery [BR:
ffa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FFWV33_07610
DNA repair and recombination proteins [BR:
ffa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FFWV33_07610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
AWG21404
UniProt:
A0A2S1LCE0
LinkDB
All DBs
Position
1733874..1734866
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSALEGYAITSVRIE
GVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDIDNESVSISVTGKDQLTAGDFQKFIS
GFQVLNPELVICNLDSKIKLNLDLTIEKGRGYVPAEENKKQNAAIGTIFTDSIFTPVKNV
KYAIENFRVEQKTDYEKLVFEIKTDGSINPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVAVKNLTFGMDLAKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcagaagcccgataaagttatcatgatcgattcaaccgatttt
gaaggtaagtttgaattcagacctttagaacctggttacggattgactgttggtaatgca
cttagaagagttttgctttcagcattagaaggttatgcaattacatctgtccgcatagag
ggtgtagatcatgagttttctactatctcaggagttgttgaagatgttaccgaaatcatt
cttaatctaaaacaagtacgtttcaaacgtcaaattgaagatatagataatgaatcagtt
agtatttctgttactggtaaagatcagttaacagctggtgattttcaaaaatttatctca
ggtttccaagttttgaatccagaactagtaatctgtaacttagatagtaaaatcaaacta
aacctagatttaacaatcgaaaaaggtagaggatatgttcctgctgaggagaacaaaaaa
caaaacgctgcaattggtaccatttttacagattcaatctttactccagtaaagaatgta
aaatatgcaattgaaaacttccgtgttgagcaaaaaacagattacgagaaattagttttt
gaaattaaaactgatggatcaattaatcctaaagatgctcttactgaggctgcaaaagtt
ttaattcaccatttcatgttattctctgacgaaagaattacactcgaggctgacgaaatt
gcgcaaacagaatcttatgatgaggaatcattacacatgagacaattgcttaaaactaag
cttgttgatatggatttatctgtgagagcattaaactgcttgaaagcggctgaagttgat
acacttggtgatttagtatcgttcaataaaaatgacctaatgaaattccgtaattttggt
aaaaaatctttaacagaacttgatgaacttgttgctgtgaagaatttaactttcggtatg
gacttagcgaaatacaaactagataaagaataa
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