Flavobacterium faecale: FFWV33_09890
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Entry
FFWV33_09890 CDS
T05515
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ffa
Flavobacterium faecale
Pathway
ffa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFWV33_09890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffa03019
]
FFWV33_09890
Enzymes [BR:
ffa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FFWV33_09890
Messenger RNA biogenesis [BR:
ffa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FFWV33_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
MIOX
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AWG21821
UniProt:
A0A2S1LDS1
LinkDB
All DBs
Position
complement(2280783..2282201)
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AA seq
472 aa
AA seq
DB search
MNYTKALQNPIFKIVAQASAELQIDSYVIGGFVRDYLLARPLKKDIDIVAVGSGIELALK
VSELLPNKPKVQVFKNYGTAMLRYKDTDIEFVGARKESYQTESRNPKVEIGTLQDDQDRR
DFTINALAFSLNESNYGDLIDPFDGVTALEAKSIKTPLNPDITYSDDPLRMMRAIRFATQ
LGFEIEAESLEAISRNKDRINIISGERIVDELNKILLTEKPSIGFLLLYKTGLLDIILPE
LTALNNVEEIEGQTHKNNFYHSLEVVDNICPNTDDVWLRWSALLHDIGKAPTKKFNKKQG
WTFHGHEFLGGKMVKRIFERLHMPLNQKMKFVQKMVVMSSRPIVLSQDLVTDSAVRRLVF
DAGDEVEDLMTLCEADITTKNPGKFKKYHNNFVIVRQKIVEVEEKDSVRNFQPPITGEQI
MEIFDLKPSREIGTLKEAVKEAILEGEIPNEYQAAYDFVLKRAQKMGLKAIK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaattatacaaaagctttacaaaaccctatttttaaaattgtggcgcaagcgagtgcc
gaactgcaaattgatagctatgttattggcgggtttgtgcgtgactatttgctagcgaga
ccgttgaagaaagatattgatattgttgccgttggtagtggtattgaattggccttgaag
gtctctgaattgttgccaaacaagccaaaggtacaggtttttaaaaattatggtactgca
atgttgcgctacaaggatacggatattgagtttgtaggcgctcgtaaggagagctaccaa
acggaaagccgcaatcctaaagtggaaattggtacgttacaagacgaccaagatcgcagg
gatttcacgataaatgcgttggctttttcgttaaacgaaagtaattatggggatttgatt
gatccttttgatggtgtaacagccttggaggctaagtccatcaaaacgcctttgaaccca
gacattacttactctgacgatcctttgcgtatgatgcgcgccatcaggtttgcaacgcaa
ttgggatttgaaattgaggcggaatccttggaagcgatttcaagaaataaagaccgcatc
aacattatctctggtgagcgtattgtggacgaattgaacaaaatacttttgaccgaaaag
ccatctattggatttttactgttatataaaacgggtttactcgacattattttgcccgaa
ttgacagctttgaacaatgtggaggaaattgaaggtcagacgcataaaaacaacttttat
cattcgcttgaagttgtagataatatttgcccaaacacagatgatgtgtggttgcgatgg
tcggctttgttgcacgatattggtaaggcaccgacgaagaaattcaacaaaaaacaaggt
tggacgtttcatggtcatgaatttttgggcggaaaaatggttaagcgaatctttgagcgt
ttgcacatgccactaaaccaaaaaatgaaatttgtacagaaaatggtggtgatgagctca
cgccctatcgtgctctcgcaagatttggttaccgattcggcagtacgccgcttggtgttt
gacgctggtgatgaagtggaagatttgatgacgctttgcgaagcagatatcacgaccaaa
aacccagggaaattcaagaaataccacaataattttgtgattgtacgtcagaaaattgtg
gaagtagaggaaaaagattctgttcgaaattttcaaccaccgattacaggagagcaaatc
atggaaatttttgatttgaaaccttcaagagaaattggaacattgaaagaagcggttaaa
gaagccattttggaaggtgagattccgaatgaataccaagccgcatatgattttgtgtta
aaaagggcacaaaaaatgggcttgaaagcaataaaataa
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