Flavobacterium faecale: FFWV33_13265
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Entry
FFWV33_13265 CDS
T05515
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ffa
Flavobacterium faecale
Pathway
ffa03030
DNA replication
ffa03430
Mismatch repair
ffa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ffa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFWV33_13265
03430 Mismatch repair
FFWV33_13265
03440 Homologous recombination
FFWV33_13265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffa03032
]
FFWV33_13265
03400 DNA repair and recombination proteins [BR:
ffa03400
]
FFWV33_13265
Enzymes [BR:
ffa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFWV33_13265
DNA replication proteins [BR:
ffa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFWV33_13265
DNA repair and recombination proteins [BR:
ffa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFWV33_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AWG22423
UniProt:
A0A2S1LFA3
LinkDB
All DBs
Position
3103117..3106167
Genome browser
AA seq
1016 aa
AA seq
DB search
MYLNCHSFHSLRYGTIPLDDLIEKAVRSGVTAMALTDINTVTGIYDFIIECKKVSIKPII
GIDFRSDNEFRYIGLAKNASGLAEMNRFLTKHNFDKSPLPMEAPAFESVMVIYAFAKAPM
VLKTNEYIGVRPEEVGKLFGYKGSLDKMVVLQPVTFRTKKEYQLHKILRAIDNNVLLSKL
TPEAIATPYEVMVEEERLRAVYKDYPQLLANTQMVMDSCDFQYDFATPKNKKHYTNSSES
DIALLTTLAHQGMEWRYGKKDKIALARVQKELKVIHELQFSGYFLITWDIIRYSNSRGFL
HIGRGSGANSIIAYCLGITDICPIELDLYFERFLNENRKSPPDFDIDWSWQERDVILEYI
FNRYGYENVAFCGTNVEFKYRSIFREVGKVFGLPKEELDHLAKNPMRLQQTNSVVQEVQE
YGMLLEKYPNQRSMHSCGIIISEEPITNYTPLEMPPKGFPIVLFDMHVAEAIGFEKFDIL
SQRGIGTIDDTVKLVAKNRGIQINIRDTSLSKNEKLANTFLAQGKTIGCFYIESPAMRGL
LRRLSCDNYKTLVAASSIIRPGVAKSGMMKEYIFRHNNPSQFEYFHKVFEEQLGETYGIM
VYQEDVIKIALHYGGLPAADGDILRRAMSGKGRSLAALQKVKDHFFESCALQGHPEILSQ
EIYRQIESFAGYSFCKAHSASYAVESYQSLYLKVYYPVEFMVAVINNQGGFYRTEVYIHE
ARMAGGTIHNPCVNKSELTTTLYGNDIYLGFMHLQGLAEKLAGEIVRERELQGDYLSLED
FCNRVKIGLESLKLLIFIGAFRETGKTKNQLLILASLLFNSAPTDHQMLLLQESVKEYQL
PKLERSRFEDAFDEIELLGFPTSFTPFDLLQTPFRGDVMAKDLALNHKKQVRMLAYLISR
KQVPTARGTMFFGTWVDFEGTYFDTTHFPDNLQVYPFQGGGCYLLLGTVEVDYHFPTLTI
LKMAKLPFVPDPRYSDSKDHQFITQQRMKEDVSSTQRAPYPQAHKINLPRNKMNLS
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcaattgtcattcttttcactccttgcgctacggcacgattccgcttgacgac
ttgatcgaaaaggctgttcggtcaggtgttaccgctatggcattgaccgatatcaatacc
gttacgggaatttatgattttattatcgaatgtaaaaaggtaagtattaaaccaataatc
ggaattgattttcgttcggataatgaatttcgatacatcggtttagccaaaaacgcgagt
ggattggcagagatgaatcggtttttgaccaagcacaatttcgataaaagccctttgcct
atggaagctcctgcctttgaatcggtgatggttatttacgctttcgcgaaagcgccaatg
gtacttaaaaccaatgaatatataggtgtccgcccggaagaagtagggaagttgtttggt
tataaaggaagtctggataaaatggtggtgctacaaccggtgacttttcgaactaaaaaa
gaataccaactccacaaaattctacgagcgattgataacaatgttttgttgtccaaatta
actcctgaagctattgcaacgccctatgaagtcatggtggaagaggagcgtttgcgagct
gtttacaaggactatccgcaattgctagccaatacgcaaatggttatggacagttgcgat
tttcaatacgattttgcgactccaaaaaacaaaaaacattacaccaattcgagcgagagt
gatattgcgttgctcactactctcgcgcatcaaggcatggaatggcggtacggaaaaaag
gataaaattgctctagcacgagtgcaaaaagaactgaaagtgattcacgaattgcagttt
agcggttactttttgattacttgggatattattcgatacagcaacagtcgtggttttttg
catatcgggcggggtagcggcgccaactcgattattgcctattgccttggaattacggac
atttgcccaatagaactcgacttgtattttgagcgttttttgaatgaaaaccgcaagagt
ccacccgattttgacattgattggagctggcaagaacgcgacgtgattttggaatatatc
ttcaatcgttacggatacgaaaatgtagctttttgtggaaccaatgtggagttcaaatac
cgttcgatatttagagaagtcggtaaagtttttggtttacccaaagaagaattggaccat
ttggccaaaaacccgatgcggttgcagcaaaccaatagcgtagtgcaagaagtgcaagaa
tacggcatgttgttagaaaaatatcccaaccaacgcagcatgcattcgtgtggaattatc
atatccgaagaacccattaccaattacacccccttggaaatgcctccaaaagggtttcct
attgtgctttttgatatgcatgtcgccgaagcaattggtttcgaaaaattcgatattctg
agccagcgtggtattgggaccattgatgatacggtaaaactagttgccaaaaatagaggg
attcagattaatattcgagacacttccctttcgaaaaatgaaaaattggccaatactttt
ttggctcaaggaaaaaccattggttgtttttatatcgaaagtcccgctatgcgtgggttg
ttgcgtcgtttaagttgtgataattataaaactttggtggcggcttcgtcaatcattcga
ccaggtgtggccaagtcgggtatgatgaaagagtatattttcaggcataataatccttct
caatttgaatattttcataaagtattcgaagagcaattaggcgaaacttacggtattatg
gtttatcaagaagatgtgattaagattgcgttgcattacggtggtttgcctgctgccgat
ggtgatattttgcgtcgcgccatgagtggcaaaggacgttcgttggcggccttacaaaaa
gtaaaagaccatttttttgagagttgtgccctgcaaggtcatcccgaaatactaagtcaa
gaaatttaccgacagatagaatcgtttgcgggttattcgttttgcaaagcacattcggct
tcgtatgcagtggagagttaccagagtttgtacctcaaagtctattatccggttgagttt
atggtggcggtcatcaacaatcaaggtggtttttatcgtacagaagtctacatacacgaa
gcgagaatggcaggcggaaccattcataatccttgtgtgaataaaagcgaattaactacc
actttatatggcaatgacatttatttgggttttatgcatttacaaggcttggcagagaag
ttggcgggagaaattgtgcgcgaaagagaattgcaaggcgattatttatcgttggaagac
ttttgtaatcgagtaaaaatcggattggaaagtttgaaactattgatttttataggtgct
tttcgcgaaacaggcaaaaccaaaaaccaactgctcattctggcaagtttactgtttaat
tcggctccaacagaccatcaaatgctcttgttgcaagaatcggttaaggagtaccaattg
cccaaattggagcgttctcgatttgaagatgcttttgacgaaatagaactcctaggtttt
cccacttcgtttacgccttttgatttgttgcaaacaccttttcggggtgatgtaatggca
aaagatttagctttaaaccataaaaaacaggttcgaatgttggcttatttgatttcgaga
aaacaagtccccacagctagaggcacgatgttttttggtacttgggtcgattttgaaggc
acttattttgatacgactcattttccagataatttgcaagtatatccttttcagggtggt
ggttgctatttgctattgggcactgttgaggttgattaccattttccaacccttacgatt
ttgaaaatggcaaaactaccttttgtgcccgacccaaggtattcagactccaaagaccat
cagttcattacgcaacaaagaatgaaagaagatgtgagcagtacgcaaagagcgccttat
ccgcaagcacataagattaatttgcctagaaataaaatgaacttgagttag
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