Fusarium falciforme: NCS54_00028800
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Entry
NCS54_00028800 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ffc
Fusarium falciforme
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_00028800
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCS54_00028800
Spliceosome [BR:
ffc03041
]
Complex C
Other components
Complex C specific factors
NCS54_00028800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
AAA_30
AAA_23
T2SSE
nSTAND3
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
77786237
NCBI-ProteinID:
XP_053001917
LinkDB
All DBs
Position
1:complement(join(1193780..1195585,1195636..1195857))
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AA seq
675 aa
AA seq
DB search
MGDLDLDSTFIPALHKPAALLPIAKHRESLLYVVETHPVTIVIGQTGSGKTTQIPQFLEQ
AGWCSDGKIIGITQPRRVAATTVAVRVAEEVGCEVGKEVGYSIRFEDVTSASTKIKFLTD
GLLIREALVDPLLTRYSVIMVDEAHERSISTDILLGLLKKIRRKRPDLRIIISSATLQAK
EFLDFFTRTSDDQPTKGNGDEKNEIGAIVSLEGRTYPIDILYLESPAENYLEKAIDVVFD
IHTQEGEGDILVFLTGREEIDNAIQAVSERLADLNPKYGTLMPLPLYAGLSTEQQMYIFD
KTPKGTRKVVFSTNIAEASVTIDGIVYVVDSGFVKLRAYDPRTGIESLTATPVSKAAASQ
RAGRAGRTKPGKCFRLYTEQSYQSLQEANIPELQRSNLAPVILQLKALGIDNVVRFDFLS
PPPSELMSKALELLYALGALDEYAKLTRPLGSRMAELAVEPMMAKTLLSAQSFGCLSEML
TIAAMTSLGGSVWFSHEGERKKMETSRRKFAVDEGDHLTLLNAYQAFVTKGRKEAKFCHE
NNLNYKSMSRAVSIRAQLKRYLERFSINVDETLAGQASVDNIKKAEQIRRCLTSGYFAHA
ARMQPDGTFRNVEGGTVLHAHPSSLMFNRKADWVIFHEAMETGGKIFIREVTKIEKGWLL
EYAPEFYKVTSDRRG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttggatttggactcaactttcattccggctcttcacaagccagctgctctt
cttcccatcgccaaacaccgagaaagtttgctctatgtcgtagagacacacccagtcacg
atcgttattggtcagacgggttccggaaagacgacacagatcccacagttcctagaacag
gcaggatggtgctcagacgggaagatcattggcatcacacagccccgccgagtcgcggca
accacagttgcagtacgtgtggctgaagaagttggctgtgaagttggaaaggaggtcgga
tactctattcgattcgaagatgtcacttctgcctccaccaagatcaagtttctcactgat
ggcctgctcatacgggaggccctcgtcgatcctctgctgacgcggtactctgtcatcatg
gtagatgaggcacatgaaaggtccatcagcactgacattctccttggcctactcaaaaag
atccggcgaaaacggccagaccttcgcatcatcatcagcagtgccaccctgcaggccaag
gagtttctggatttcttcacgaggactagcgatgaccaacccaccaaggggaatggagat
gagaaaaatgagattggagccatcgtcagcctggaagggaggacgtatccgatagacatc
ctatatctggagtcaccggcggagaattacctggaaaaggccatcgacgtggtcttcgac
atacacacccaagaaggcgaaggagacattctcgtctttctcaccggccgagaagaaatc
gacaacgccattcaggccgtaagcgagcgattggctgacctcaacccaaaatatggcact
ctgatgccattgccgctctatgctggtctctctaccgaacagcagatgtacatattcgac
aaaacacccaagggcacacgaaaagtggtgttctcgacaaacatcgcagaagcatcagtg
actatcgacggtatcgtctacgtggttgacagcggatttgtgaagctgagagcctatgac
ccaagaacgggaatagagtcactcaccgccacgcctgtctccaaggcggcggcatcacaa
cgcgctggacgagctggacgaacaaagccagggaagtgctttcgactttacaccgagcaa
agttaccaatcattgcaggaggccaacatcccagagctccagaggtcaaatctggcccca
gtcatcttgcagctgaaggcactggggatagacaatgttgttcggttcgactttttatca
cccccaccttccgagctgatgtccaaggcactggaactgctctatgctctaggagcactt
gacgaatacgccaaactgacccggccccttggctcaaggatggctgagctggcggtggaa
cccatgatggccaagaccctcctgtcagcgcaatcctttggctgcctcagcgagatgctt
acaattgctgccatgaccagtcttgggggcagcgtatggttttcgcacgagggcgagagg
aagaagatggaaacgtcacgaagaaagtttgctgttgacgagggagaccatttaaccctc
ctcaacgcgtaccaggcctttgtcaccaagggaagaaaggaggccaagttttgtcacgag
aataacctcaactacaagtcgatgagtcgagcggtgagtatcagggcacagctgaaacga
tacctggagaggttcagcatcaatgtcgatgagacgctcgctggacaagcatcggtggac
aatatcaaaaaggcggaacagatccgacgctgcctcacatcaggatactttgcccatgcg
gcgaggatgcagcccgacggaacgtttcgcaacgttgaaggaggaacggtgctgcacgcg
catccaagctctctcatgtttaaccgtaaagcggattgggtcatcttccacgaggcgatg
gagacgggtggcaagatcttcatccgggaagtgaccaagatcgagaaaggctggctgcta
gagtacgcgccagagttctataaggtgacatcggataggcgggggtaa
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