Fusarium falciforme: NCS54_00046000
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Entry
NCS54_00046000 CDS
T09198
Name
(RefSeq) Sm protein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00046000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00046000
03041 Spliceosome [BR:
ffc03041
]
NCS54_00046000
03032 DNA replication proteins [BR:
ffc03032
]
NCS54_00046000
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
NCS54_00046000
Spliceosome [BR:
ffc03041
]
Complex A
U1 snRNP components
Sm proteins
NCS54_00046000
U2 snRNP components
NCS54_00046000
Complex B
U1 snRNP components
NCS54_00046000
U4/U6.U5 tri-snRNP components
NCS54_00046000
Complex C
U2 snRNP components
NCS54_00046000
DNA replication proteins [BR:
ffc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
NCS54_00046000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
ADH_N_2
Motif
Other DBs
NCBI-GeneID:
77786409
NCBI-ProteinID:
XP_053002085
LinkDB
All DBs
Position
1:join(1757353..1757552,1757614..1757683)
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AA seq
89 aa
AA seq
DB search
MSFAPLNPRPMLQDLVSRTVLVRLKWGEVEYKGTLVSVDSYMNLQLSGTEEYIADKPTGS
LGQVLIRCNNVLWVRGADEGKDTDAAMTG
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgcacccctcaacccccgtcctatgctgcaggacctcgtcagcaggaccgtt
cttgtccgcctaaaatggggcgaggtggaatacaagggcacactcgtctctgttgacagc
tacatgaacctccagctctctggcaccgaggagtacatcgccgacaagcccactggctct
ctgggccaagtgttgattcggtgcaataacgtcctgtgggtgcgcggcgccgacgaaggc
aaggacacggatgctgcgatgacgggctaa
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integrated database retrieval system