KEGG   Fusarium falciforme: NCS54_00063600
Entry
NCS54_00063600    CDS       T09198                                 
Name
(RefSeq) Hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ffc  Fusarium falciforme
Pathway
ffc03020  RNA polymerase
ffc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ffc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCS54_00063600
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCS54_00063600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ffc03021]
    NCS54_00063600
   03019 Messenger RNA biogenesis [BR:ffc03019]
    NCS54_00063600
   03400 DNA repair and recombination proteins [BR:ffc03400]
    NCS54_00063600
Transcription machinery [BR:ffc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     NCS54_00063600
Messenger RNA biogenesis [BR:ffc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NCS54_00063600
DNA repair and recombination proteins [BR:ffc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NCS54_00063600
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 77786585
NCBI-ProteinID: XP_053002257
LinkDB
Position
1:complement(join(2397087..2397102,2397156..2397325,2397381..2397461,2397514..2397762))
AA seq 171 aa
MFFLYNLERRVTLHPSFFGRNMHDLVTHKLLTDVEGTCAGSYFIISIMDTFDISEGRILP
GNGLAEFTVGYRAVVWRPFKGETVDAVVYSINPQGFFARAGPLQLFVSAHLIPSDIKWDP
NATPPQFTNNEDTVIEPDTHVRVKIIGTRTEVGEMWAIGSIKEDYLGCLQD
NT seq 516 nt   +upstreamnt  +downstreamnt
atgttctttctctacaatctggaacgcagggtcaccctgcacccatcgttcttcggtcgc
aacatgcacgatctcgtgacacacaagctcctcaccgacgtcgagggcacatgcgccggc
agctacttcatcatttccatcatggacacctttgacatctccgagggccgcatcctccct
ggaaacggcctcgcagagttcacagttggctatcgcgctgtcgtatggcggcccttcaag
ggcgagacggtcgatgcagtcgtgtattcgatcaacccgcagggtttctttgcccgagca
ggaccactgcaactgtttgtatcagcgcatttgattcctagcgacatcaagtgggatccc
aacgcgacaccaccccaattcaccaacaatgaggacacagtcattgagcccgatacccac
gttcgcgtaaaaatcattggtaccagaaccgaggtcggagagatgtgggctattggcagc
atcaaggaggactacttggggtgcctccaggattaa

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