Fusarium falciforme: NCS54_00064500
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Entry
NCS54_00064500 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00064500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_00064500
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCS54_00064500
Spliceosome [BR:
ffc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NCS54_00064500
Complex C
U5 SnRNP specific factors
NCS54_00064500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
BRR2_plug
ResIII
Helicase_C
AAA_22
CtnDOT_TraJ
Motif
Other DBs
NCBI-GeneID:
77786594
NCBI-ProteinID:
XP_053002266
LinkDB
All DBs
Position
1:complement(join(2423966..2424506,2424561..2430640))
Genome browser
AA seq
2206 aa
AA seq
DB search
MSEANRDVSQYKYSAMSNLVLQADRRFVTRRTDEATGDPESLAGRLSIRDMGARVARDDA
PKPKKQPGLPDIERGSLREGEDILAREQRRRKAEAHQSAGVLGANDLLVEGITYRPRTPA
TRATFDLIITIVANNLGDVPHEVVRSAADAVLEYLKDDDLKDLDKKKEIDDILGVALNPK
QFNELVNLGKKITDYDAQDDDEDVAMGGADGDDAEIDERQGVAVAFDEDEDDEEGGIVHE
VRDESSDDEEEEEEKDENAEAKDEDAVVDVGDEMILDSAPSGGKHAEKEKHSVPARDIDA
FWLQRQIGILYPDAHEQTDKTKEALRILSGEPDEADGEEKSLREIENDLMELFDFEHHEL
VQKLVENREKVYWLTKLARAETPEQRADVEREMGSEGLQWILNELKGHSSGEGKKAKMDI
KMDIDVPASFTAEAPKPERAEGQLVGGLQPRKLINLDNLVFDQGNHLMTNPKVRLPEGST
KRTFKGYEEIHIPTPKKRNEPGDVLIPITDMPEWSRNPFSKNQSLNKIQSKCYPSAFEDD
GNMLVCAPTGSGKTNVGMLAILREIGKHRNPETGDIDLDAFKIVCIAPLKALVQEQVGNL
GNRLEPYGIRVSELTGDRQLTKQQIAETQIIVTTPEKWDVITRKSNDLTYTNLVRLIIID
EIHLLHDDRGPVLESIVSRTIRKTEQTGEPVRIIGLSATLPNYRDVASFLRVDTKKGLFH
FDGSFRPCPLRQEFVGVTDRKAIKQLKTMNDVCYNKVIEHVGTNRNQMLIFVHSRKETAK
TARYIRDKALEMDTINQILRHDAGSREVLNEASSQATDKDLKDILPYGFGIHHAGMSRID
RTDVEDLFARGAIQVLVCTATLAWGVNLPAHTVVIKGTQVYSPEKGSWVELSPQDVLQML
GRAGRPQYDTYGEGIIITTQSEMQYYLSLLNQQLPIESQFVSKLVDNLNAEIVLGNVRTR
DEGVEWLGYTYLFVRMLRSPGLYQVGAEYEDDEALEQKRVDLIHSAAMVLRKSNLIKYDE
KTGKLQSTELGRIASHYYITFGSMETYNNLIQPSITTIELFRVFALSAEFKYIPVRQDEK
LELAKLLGRVPIPVKESIEEPHAKINVLLQAYISRLKLDGLALMADMVYVTQSAGRILRA
IFEIALKKGWASVAKTALDLCKMAEKRMWPTMSPLRQFPSCPRDVVQKAERIDVAWSSYF
DLDPPRMGELLGMPRAGRTVCGLVAKFPRVEVQAQVQPMTRSMLRVELSITPNFEWDDSV
HGAAENFWILVEDCDGEDILYHDTFLLRKEYAESETNEHIVDFTVPITDPMPPNYFVSVV
SDRWMHSETRLPVPFHKLILPEKFPPHTEPLELQPLPVSALKVASYVDLYPDWKQFNRIQ
TQTFNSLYKTDQNVFVGAPTGSGKTVCAEFALLRHWTQADSGRAVYIAPFQELVDSRLQD
WQKRLSRLNGGKEIVKLTGETATDLKLLEKGDLILATPTQWDVLSRQWKRRKNVQTVELF
IADEIHLLGGFQGYVYETIVSRMHYIRSQTELPMRIVALSVSLANARDIGEWIDAKKHDI
YNFSPHVRPVPLELHLQSFTNPHFPSLMLAMAKPTYLAITQMSPDKPAMIFVPSRKQTRA
TARDLLAACFADDDEDRFLHAEVKQMQPLLERIHEEALAEALSHGVGYYHEALSQSDRRI
VKHLYDNGAIQVLVASRDVCWELNSTAHLVIVMGTQYFEGREHRYVDYPLSEVLHMFGKA
LRPSKDGRGRGVLMLPQVKREYYKKFLNEALPVESHLHNYLHDAFVTEISTKMIESGDDA
INWTTFTYFYRRLLANPSYYSLTSTTHEGLSNYMSDLVETTLRELSESKIIDFDEEDGSV
SPQNAAMIAAYYNISYITMQTFLLSLSARTKLKGIMEIVTSATEFESIQIRRHEDGLLRR
IYDRVPVKMSQPVYDSPHFKAFVLLQAHFSRMQLPIDLAKDQEVLISKVLSLLSAMVDIL
SSDGHLNAMNAMEMSQMIVQGMWDRDSPLKQIPHFTPEVVKVANDFGIKDIFDFMEAMNP
DENADYNKLVKRLGLSQKQLAEAANFTNDKYPDLELEHEILDADEIRAGEPAYLSIKIAR
NLEEEDGDYDSTVHAPFYPVKKMENWWLVVGDEKTKNLLAIKRVTIGRELNVRVEYTVPS
PGEHDLKLFLMSDSYVGVDQEREFSVTAAEGMDVDDDEEDSDEDEE
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagcaaatcgagatgtctcgcagtacaagtactcggccatgtcgaacctggtc
ctccaggcggaccgtcgattcgtcacgcgacgaaccgatgaggccactggtgatccagag
tcgctggctgggcgcttgagcatccgggacatgggcgctcgagttgcccgcgacgacgcg
ccgaagccgaagaaacaacccggactcccagatatcgagaggggaagtctgagagaaggc
gaagatatcctggcacgagaacagcgaaggcggaaggcggaagcgcaccagtctgccggc
gtcctcggcgctaacgacctcctggtggagggcatcacataccggccgcgcacaccagcg
acacgagcgacgtttgatctaatcattacaattgtggcgaacaatctcggcgacgtaccc
cacgaggtcgtgcgcagcgcggcggacgctgtgctggagtatttgaaggacgacgatttg
aaggacctggacaaaaagaaggagatcgacgacatcttgggtgtggctttgaaccccaag
cagttcaacgagttggtaaatctaggaaagaagatcacagactacgatgcccaggatgat
gacgaggatgtcgccatgggaggtgctgatggtgacgacgccgaaatcgacgaacgccaa
ggtgttgctgtagcctttgacgaagacgaagacgatgaagaaggcggcattgttcacgaa
gttcgcgacgaatcatcggatgacgaggaggaagaggaagagaaggacgagaatgccgag
gccaaggatgaagatgccgttgtcgatgtgggtgatgaaatgatcctcgactcagcacca
tcaggaggcaaacatgccgagaaagagaagcatagcgtgcccgcacgagacattgacgcc
ttttggttacaacgccaaattggtatcttataccctgatgctcacgagcagaccgacaag
accaaggaggcgcttcgcattctttcaggcgagccagacgaggccgatggcgaggaaaag
tcgctgcgcgagattgaaaacgacctcatggaattattcgactttgaacaccacgagttg
gtccagaagctcgttgagaacagagagaaggtctactggctcaccaagctagctcgcgca
gagactcccgaacaacgcgccgatgttgaaagagagatgggctcggaaggtctgcaatgg
attctcaacgagttaaagggccatagttcaggcgagggcaagaaggccaagatggacatt
aagatggatatcgacgtcccggcctctttcaccgcagaggcacccaagcctgagcgcgcc
gaaggccagctggttggcgggcttcagcccaggaagctcatcaacctcgacaacctggtc
tttgatcaaggaaaccatctcatgacaaaccccaaggtccgactacctgaagggtcgacc
aagaggacattcaagggctacgaggaaattcacattcctacccccaagaagcgcaacgag
cccggcgatgtcttgattcccattaccgatatgccagagtggtctcgcaaccccttcagc
aagaaccagtccctgaacaagatccagtccaagtgctacccttcagcatttgaagatgat
ggcaacatgcttgtttgtgctcccactggtagtggaaagaccaacgttggtatgcttgct
atccttcgcgaaatcggcaagcaccgcaaccctgagactggtgatatcgaccttgatgca
ttcaagattgtgtgtatcgcccctctcaaggccctggtacaggagcaggtcggcaacttg
ggaaaccgactcgagccctatggcattcgagtttcagaattgactggtgatcgtcagctc
accaagcagcaaatcgccgaaacacagatcattgtgaccactcctgaaaaatgggatgtc
atcaccagaaagtcaaatgacctgacctatacaaacctggtgcgcctgatcatcatcgac
gaaatccatctgttgcacgatgaccgtggacctgtactggagagcatcgtcagcagaacg
atccgcaagaccgagcagacaggtgaacccgtccgtatcattggtctctctgctactcta
cctaactaccgagatgttgctagcttcttgcgggtagacaccaagaagggcctcttccac
tttgacggctccttccgaccatgccccctgcgtcaggagtttgttggagtcacggatcgc
aaggccattaagcaactcaagacgatgaacgatgtgtgctacaacaaggtcatcgagcac
gtgggcacaaacagaaaccaaatgctcattttcgttcactctcgaaaggagactgccaag
acagcccgttacattcgagacaaggcgctcgagatggatacgatcaaccagattcttcga
cacgacgctggcagtcgagaagttctcaacgaggcatcgtctcaagcaaccgacaaggac
ctcaaggacattcttccctacggttttggtatccatcatgctggtatgagcaggatagac
aggacagacgtggaggacctctttgcccgtggcgctatccaggttttggtgtgcactgcg
acactggcttggggtgtgaacttgccagcacacacagtcgtcatcaagggaacacaagtc
tactctcccgagaagggtagctgggttgagctgagtccacaggatgttctgcagatgctt
ggacgtgcaggtcgacctcagtacgacacctacggtgaaggtattatcatcacgacacaa
agcgagatgcaatactacctctcgcttctgaaccagcagcttccgattgaaagtcagttc
gtgagcaaattggtcgacaacttgaacgccgagatcgttcttggcaatgtcagaacacgc
gacgaaggtgttgagtggttgggatatacctatctgttcgttcgaatgctccgttcgcct
ggtctgtaccaggtcggggctgagtatgaagatgatgaagctcttgagcagaagcgggtt
gacctgattcattctgctgccatggttctccgaaaatccaacctcatcaagtacgatgag
aagacgggaaagctccagtcaaccgagctcggtcgcatcgcttctcattactacatcacc
tttggatccatggaaacctataacaacctaattcaaccctccatcacaaccattgagctg
ttccgcgtctttgctctgagcgccgagtttaagtacatccctgttcgacaagacgagaag
ctcgagctagccaagctcctgggtcgtgtgccgattcctgtcaaggagagtatcgaggag
ccccatgccaagattaatgtgctgctgcaagcgtacatctcgcgcctcaagcttgatggc
ctggccttgatggcggatatggtgtacgtgacccagtctgccggccgtattctccgcgcc
atctttgagatcgcgttgaagaagggctgggcttctgttgccaagaccgctctggatctt
tgcaagatggccgagaagcgcatgtggccgaccatgtctccccttcgtcaattcccttca
tgccctcgggatgtcgttcaaaaggcagagagaatcgatgtggcttggagcagttacttc
gacctggacccccctcgcatgggcgagcttctgggcatgcctcgagctggtcggactgtc
tgtggcctcgtcgccaagttccctcgcgttgaagtccaggctcaagtgcagcccatgact
cgttcgatgctacgtgttgagttgagtatcactcccaactttgaatgggatgattctgtc
catggagctgccgagaacttctggatcctggtcgaagattgcgacggcgaggatattctc
taccacgacactttcttgctccgcaaggagtatgccgagtctgagacgaatgagcacatc
gtcgatttcacggtgcccatcacagaccccatgcctcccaactacttcgtctcagttgta
tctgaccgatggatgcattctgagacgaggcttcccgtgcccttccacaagctgatcctg
cccgagaagttccctccccacactgaacctctcgagcttcagcctctgcctgtctccgct
cttaaggtggcaagctacgttgacctctaccctgactggaagcaattcaacaggatccag
actcaaacgttcaactctctgtacaagacagaccagaacgtatttgttggagctcccaca
ggcagcggcaagacagtttgtgctgagtttgctcttctccgacattggacacaggctgac
tctgggcgggccgtgtacattgcgcctttccaggagcttgtcgattctcgccttcaggac
tggcagaagcgattgagccgtctgaacggcggaaaggagattgtgaagctcactggcgag
acagccactgatcttaagctcctggagaagggcgacctgatcctggccactccaacccaa
tgggatgttttgtccagacaatggaagcgccgcaagaacgttcagaccgtggagcttttt
attgctgacgagattcaccttctgggaggcttccagggttatgtgtatgagacgatcgtg
tcccgcatgcattatatccgcagccagactgagctccccatgcgaatagtcgctctcagc
gtgtcgcttgcaaacgcacgagatattggcgagtggattgatgccaagaagcacgacatc
tacaacttcagcccccacgttcggcctgtgcctcttgagcttcatctacagtctttcact
aaccctcacttcccgtctctgatgctggccatggctaagcccacatacttggctatcaca
caaatgtctcctgacaagcccgccatgatcttcgtgcccagccgcaagcagacacgagca
accgcccgtgaccttctggctgcctgcttcgccgacgacgacgaggatcgcttccttcac
gccgaagtgaagcaaatgcagcccctgcttgagcgcatccacgaggaggcgcttgccgag
gcgctgtcccatggtgttggttattaccatgaggctctcagccagagtgacaggcgaatt
gtcaagcatctttacgacaacggcgctattcaggttctcgttgcgtcgcgagatgtctgc
tgggaactgaacagcactgcccatctcgtcatcgtcatgggaacgcaatactttgagggt
cgtgagcatcgatatgttgactaccccctcagtgaggtgctgcacatgtttggcaaggcc
cttcgtccatccaaggatggtcgcggccgtggtgtcctcatgcttccccaagtgaaacgt
gagtattacaagaagttcctgaatgaggctcttccagtagagtcgcatcttcacaactac
ctgcacgatgcgtttgtcactgaaatcagcaccaagatgatcgagtctggtgatgacgcg
atcaactggacgacattcacctatttctaccgccgactgctcgccaaccccagctactat
agcttgacaagcacaactcacgagggcctgagcaactacatgtctgatctggtcgagacg
accttgcgtgagcttagcgagtcaaagattatcgactttgacgaagaggacggctccgtg
tcgccgcagaacgctgccatgattgccgcctactacaacatctcgtacattaccatgcag
accttcctgctctcgctcagcgctcgtacgaagctcaagggcatcatggaaatcgtcaca
tctgcgaccgagtttgagtcgatccaaattcgacgccacgaggatggtctcttgcgacgc
atctacgaccgggtccctgtcaagatgtctcaaccagtttatgactcaccacacttcaag
gcctttgtgctactccaggctcacttctcgcgaatgcagttgccaattgacctggccaag
gatcaagaggtgttgatctcgaaggtcctcagcctcctcagtgccatggtcgatatcctg
tcctcggacggtcatctcaacgccatgaatgccatggagatgtcacaaatgattgtccaa
ggcatgtgggatcgggatagtcctcttaagcagattcctcactttactccagaggttgtc
aaggtggcgaacgattttggcatcaaggacattttcgatttcatggaggcgatgaaccca
gacgagaatgccgattacaacaagcttgtcaagcgactgggcctgtcgcagaagcagctg
gctgaagcagccaactttacaaatgacaagtaccctgatctggaactcgagcacgagatt
ctggacgcggacgagatcagggctggtgagccagcatacctaagcatcaagattgcgcgc
aacctcgaggaggaggatggcgattacgattctacggtgcatgcgccattctaccccgtc
aagaagatggagaactggtggctggttgtcggtgatgaaaagaccaagaatcttttggcc
atcaagcgagtgacaatcgggcgggaactgaacgtccgggtcgagtacactgtgccatca
ccaggtgagcacgacctgaagctgttcctaatgagcgatagttatgttggagtcgaccaa
gagcgggaattctcggtgacggcagccgagggcatggatgtggacgacgatgaggaggac
tcggacgaagacgaggagtag
DBGET
integrated database retrieval system
