KEGG   Fusarium falciforme: NCS54_00072900
Entry
NCS54_00072900    CDS       T09198                                 
Name
(RefSeq) RPOL4c domain-containing protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ffc  Fusarium falciforme
Pathway
ffc03020  RNA polymerase
ffc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ffc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCS54_00072900
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCS54_00072900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ffc03021]
    NCS54_00072900
   03400 DNA repair and recombination proteins [BR:ffc03400]
    NCS54_00072900
Transcription machinery [BR:ffc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     NCS54_00072900
DNA repair and recombination proteins [BR:ffc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NCS54_00072900
SSDB
Motif
Pfam: RNA_pol_Rpb4 Spexin DUF6036
Other DBs
NCBI-GeneID: 77786678
NCBI-ProteinID: XP_053002346
LinkDB
Position
1:complement(join(2720544..2720665,2720722..2720849,2720916..2721130))
AA seq 154 aa
MENGQAPKPKRINHPRTSRPKPPPPGNEEASTVLNLGEFQEVDTLTLSEAALVLNALVAK
RRNDRKNVNETEMLNQTLTYLDHFARFTQKENVEAVERLLSAHKNLAKFERAQLGSLCCE
NADEAKTLIPSLADKIKDEDLQDLLDEISKLQNR
NT seq 465 nt   +upstreamnt  +downstreamnt
atggagaacggccaggctcccaagccaaagaggatcaaccatccccgaacctcgcgcccc
aagcctccgcccccgggcaacgaggaggcatccacggtcctcaacctcggcgagttccag
gaggtcgacaccctgaccctctcggaagccgccctggtcctgaacgcgctggtcgccaag
cgacggaacgaccgcaagaatgtgaacgagaccgaaatgcttaaccagaccctcacctac
ctcgaccatttcgcccgattcacacaaaaggagaatgtcgaggctgtagagcgcctcctc
agcgcacacaagaacctggccaagtttgagcgcgcgcagctgggttcactatgctgcgaa
aacgccgacgaggcaaagactctgattccgtcactggccgacaagatcaaggacgaggac
ctccaggatctcctcgacgagatttccaagcttcagaacaggtga

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