KEGG   Fusarium falciforme: NCS54_00104200
Entry
NCS54_00104200    CDS       T09198                                 
Name
(RefSeq) Hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ffc  Fusarium falciforme
Pathway
ffc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCS54_00104200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ffc03041]
    NCS54_00104200
Spliceosome [BR:ffc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    NCS54_00104200
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 PRP4 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st WDR54 Beta-prop_RIG_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_SPT8 Nucleoporin_N
Other DBs
NCBI-GeneID: 77786991
NCBI-ProteinID: XP_053002652
LinkDB
Position
1:3728495..3730054
AA seq 519 aa
MMHPSRQAYVEDAEPNQGIALEDLPDDHDYDLHMGGTGVAPEKASAILNQFNRKRLAATI
AVPTDDGRVRAKLREMGEPMTLFGEGPVDRRDRLRELLTIQAEMDGLESGDITMEDAADE
AQEEQEEEFYSRGGPELLKARIKLAEYSLPRAKKRVQFQKAEATIPLRTHVKFRKQIKER
LQAFELQGSQTVGERHVSMTRISPNGEMVAVGNWGGQVKLVEIPTLTEKMTFRGHTNKIS
GLSWFPGATLPENNISPDTVNLASGGAEGLVHLWSLNQDTPLSTLQGHSQRVCRIEFHPS
GRYLASASEDTSWRLWDVETTAEVLLQEGHSRGVYAVSFNTDGSLLASAGLDSIGRIWDL
RTGRTIMILDGHLDGHIKPIHALDWSSDGHRVLSGSADGWIKCWDVRKVQRTGGIGAHTS
AVSDMRWYKGLDDPLDGIPPGVDDKGAQLPKKSSTFFVSSGFDKNVKIFSADDWTLVQTL
SGHTGPVASVDYSRDGKWIVSGGHDRTVKLWGRNDGEGI
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgatgcatccatcgcggcaggcgtatgtggaggacgccgaaccgaaccaaggcatcgcc
ttggaggacctccccgatgatcacgattacgaccttcacatgggagggaccggtgtcgcg
cccgaaaaagcttctgctattctcaaccagttcaatcgaaagcgactcgccgccacaatc
gctgtaccgaccgacgatggacgagttcgcgcaaagctcagggagatgggggaacccatg
accctctttggagaaggacctgtcgaccgccgagaccgattgcgcgagcttctcacgatc
caggccgagatggacggtttggagagtggtgacatcaccatggaggacgccgcagacgaa
gcgcaagaggaacaggaggaagaattctactcaagaggtggcccggagcttctcaaggcc
cgaatcaagctggccgagtactccctgcctcgagcaaagaagagggtgcagttccaaaaa
gccgaggcgactatacccctacgcacccatgtcaagtttcgaaaacagatcaaggaaagg
ttgcaagcttttgagcttcagggcagtcagacagttggagaacgacacgtcagcatgacc
aggatatcaccaaatggagagatggttgctgtaggcaactggggtggacaggtcaagttg
gttgagataccgaccttgacagaaaagatgaccttccgtggccataccaacaaaatcagc
ggcctgtcttggttcccgggtgccacccttccagaaaacaacatttctcctgacacagtc
aacctggcatcaggcggtgccgagggcctcgttcatctctggtcactgaaccaggacacg
cccctgtcaactcttcagggccattcgcagcgagtttgtcgcatcgaatttcatccttct
ggccgttatctagcctccgcatctgaggatacttcgtggaggctctgggacgtggagaca
acggccgaggtcctcctccaggagggtcactcgagaggtgtttatgctgtcagtttcaac
acggatggatcattactggcaagcgccggtctggacagcatcgggagaatctgggatctg
cgaaccgggcgcaccatcatgattctggatggtcacctcgatggccacatcaaacccatt
cacgctctagactggagctccgacgggcaccgggtcttatcaggatccgctgatggctgg
atcaagtgctgggatgtccgaaaggtgcagcggactggtggaattggtgcgcacaccagc
gctgtgtctgatatgcgctggtacaagggccttgatgatccgttggacggaataccccct
ggtgttgatgacaaaggtgcccagctccccaaaaagtcaagtacattctttgtttcgagt
ggtttcgacaaaaatgtcaaaatcttctcggccgatgactggacgctggtgcagacgctc
agcggacatactggaccggttgcgagtgtagattacagcagagacggaaaatggattgtc
agcggaggacatgaccgcacggtcaagctctggggccgcaacgacggtgagggcatctaa

DBGET integrated database retrieval system