KEGG   Fusarium falciforme: NCS54_00104400
Entry
NCS54_00104400    CDS       T09198                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ffc  Fusarium falciforme
Pathway
ffc03018  RNA degradation
ffc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCS54_00104400
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCS54_00104400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffc03019]
    NCS54_00104400
   03041 Spliceosome [BR:ffc03041]
    NCS54_00104400
Messenger RNA biogenesis [BR:ffc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NCS54_00104400
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NCS54_00104400
Spliceosome [BR:ffc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    NCS54_00104400
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 77786993
NCBI-ProteinID: XP_053002654
LinkDB
Position
1:join(3733936..3733963,3734019..3734095,3734151..3734345)
AA seq 99 aa
MATLGGYLNKKVLIVTADSRILVGTLAACDNTTNLVLNNAIERIIRTPDDPEPSAQVPLG
LYLVRGDNVCSIGLVDEALDDSINWTEVKGSAIGGIKHI
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctactctcggcggatacctaaacaagaaagtcctgatcgtcacagcagactcgaga
attctcgtcggaaccctagcagcctgcgacaacacaacaaacttggtcttgaacaatgcg
atagagcgtattatccgaacacccgacgatccggaaccctcagcccaagtgcccctgggc
ctatacctcgtgcgtggcgacaatgtctgctccatcggcctcgtggacgaggcgcttgac
gatagcatcaactggacagaagtcaagggctcagcgatcggaggcataaaacacatttag

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