Fusarium falciforme: NCS54_00115800
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Entry
NCS54_00115800 CDS
T09198
Name
(RefSeq) Small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00115800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_00115800
03032 DNA replication proteins [BR:
ffc03032
]
NCS54_00115800
Spliceosome [BR:
ffc03041
]
Complex A
U1 snRNP components
Sm proteins
NCS54_00115800
U2 snRNP components
NCS54_00115800
Complex B
U1 snRNP components
NCS54_00115800
U4/U6.U5 tri-snRNP components
NCS54_00115800
Complex C
U2 snRNP components
NCS54_00115800
DNA replication proteins [BR:
ffc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
NCS54_00115800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
77787107
NCBI-ProteinID:
XP_053002767
LinkDB
All DBs
Position
1:join(4078720..4078733,4078840..4078889,4078951..4079252)
Genome browser
AA seq
121 aa
AA seq
DB search
MKLVRFLMKCANETVTIELKNGTIVHGTISSVSPQMNTALRNVKMTIKGQDPVSLDTMNI
RGSTIRYFILPDSLPLDTLLIDDAPKPKNKARKEAERGGGRGRGRGGGRGRGRGRGRGGR
P
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttcgattcctaatgaaatgcgccaacgagacggtgacaattgagttgaag
aatggcaccatcgtccacggcaccatctcctccgtctccccccagatgaacacggccctc
cgcaacgtcaagatgacgatcaagggccaggaccccgtctctctcgacaccatgaacatc
cgaggctccaccatccgatactttatcctccccgactcgttacccctcgacaccctcctc
atcgacgatgcgcccaagcccaagaacaaggcccgcaaggaggccgagcggggcggtggc
cgagggcgcggcaggggtggcggcagaggacgtggtcgcggccgcggacggggaggacga
ccttag
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