Fusarium falciforme: NCS54_00133100
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Entry
NCS54_00133100 CDS
T09198
Name
(RefSeq) MRNA 3'-end-processing protein YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ffc
Fusarium falciforme
Pathway
ffc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCS54_00133100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_00133100
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00133100
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NCS54_00133100
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCS54_00133100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
77787280
NCBI-ProteinID:
XP_053002935
LinkDB
All DBs
Position
1:4730979..4731761
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AA seq
260 aa
AA seq
DB search
MPAAVESAASAILNHSATPYNFRFSPFLRRTYQVGLPPDRPICKAFQSGHCPNGTRCSER
HVSDAKTAQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGD
ECLYLHIDPQSRLPPCPHYDMGFCPLGPNCSKKHVRRKLCAFYLAGFCPDGPDCKEGAHP
KWSKNLEKPTLKSEEKKDEDVRMEMPRDEEMDRPREQQRDRDRDRDRDRDRDRDDGGRHG
GRHGRGGKWRGRGRFRGRGH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgcagtcgagtctgccgcatccgccatcctcaaccattcggcgaccccctac
aacttccgcttctcgcccttcctccggcgaacataccaggtcggcctaccccccgaccgt
cccatctgcaaggccttccagtctgggcactgccccaacggcacgcgatgctccgagcgc
cacgtctctgatgcgaagacggcgcagcccacgggcggcctcaactcgctcgtctgcaag
cactggctgcgcggcctgtgcaagaagggcgagcactgcgagttccttcacgagtataat
ctgcgcaagatgccggaatgcaacttctttatgcgcaacggatattgctcaaacggcgac
gagtgcctctaccttcacatcgatcctcagagtcggttgccgccctgtcctcactatgac
atggggttctgcccgctgggacccaactgctcaaagaaacacgtccgccgcaagctctgt
gccttttaccttgccggtttctgccccgatggcccggattgcaaggagggcgcccatccc
aagtggtccaagaacctggagaagccaacccttaagtcggaggagaagaaggacgaggat
gttcgaatggagatgccacgagatgaggaaatggacaggccacgcgagcagcaaagagat
agagaccgtgaccgagatcgggatcgggacagagacagggatgatggaggcagacacggc
ggtcgacacggaagaggaggtaaatggcgtggcaggggacgcttccgtggaagaggtcat
tga
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