KEGG   Fusarium falciforme: NCS54_00178700
Entry
NCS54_00178700    CDS       T09198                                 
Name
(RefSeq) Cft1-like protein
  KO
K14401  cleavage and polyadenylation specificity factor subunit 1
Organism
ffc  Fusarium falciforme
Pathway
ffc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ffc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    NCS54_00178700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ffc03021]
    NCS54_00178700
   03019 Messenger RNA biogenesis [BR:ffc03019]
    NCS54_00178700
Transcription machinery [BR:ffc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     NCS54_00178700
Messenger RNA biogenesis [BR:ffc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     NCS54_00178700
SSDB
Motif
Pfam: CPSF_A MMS1_N
Other DBs
NCBI-GeneID: 77787736
NCBI-ProteinID: XP_053003380
LinkDB
Position
1:join(6197759..6199838,6199886..6200199,6200247..6200420,6200469..6201714,6201763..6202241)
AA seq 1430 aa
MQAYTELAAPSAVTHSLTIALTSATASNLVVAKGSLLQIFTTKAISAEFDAQNQPAQPPK
AEPEFDHRAHDDDGLESSFLGGGESMLVRTDRTNNTKLVLVAELPLAGTVIGLAKIKTKH
TKSGGEALLLAYKAAKMCLCEWDPKKNTLETLSIHYYEKDELQGAPWEVAFDEYVNFLEA
DPGSRCAAFQFGSRNIAILPFRQAEEDLEMDDWDEDLDGPRPVKEPTAVANGDSDTLEAA
YTPSFVLRLPLLDPSLLHPVHLAFLHEYREPTFGILSSSQERAHSLGQKDHLTYKVFTLD
LQQRASTTILSVTDLPRDLYKMIALPAPVGGALLVGENELIHIDQSGKANGVAVNSMARQ
ITSFSLSDQADLNLRLEGCIIEQLYIENGELLLILNDGRLGIVSFRIDGRTVSGISVKMI
PEENGGSLIKSRASTASKLGKNTFFIGSETGDSVVLGWSRKMSQEKRRKTRLVDADLGLD
VDELDLEDDDDEDDDLYGTESTAAKPAQALNGAGKSGELSFRIHDTLLSIAPIRDLTSGK
AAFLPDSEEATLSKGVVSDLQLACVVGRGNSGSLAILNRHIQPKIIGRFEFPEARGFWTM
CVKKPVPKSLGGNVTVGNDYETFGQHDKYMIVAKVDLDGYETSDVYALTAAGFETLKETE
FDPAAGFTVEAGTMGKQMRVIQVLKSEVRSYDGDLGLTQILPMLDEETGAEPRVVSASIA
DPYLLLIRDDSSVLIAQIDSNNELEEVEETDNTLQSTKWHAGCLYTDTKGVFQPSVGDKG
ADTSKIMMFLLSSTGALHVYALPDLSKPVYVAEGLCYVPPYLSADYTLRRGLARENLREL
LVADLGDTVSQSPYLILRNQTDDLTIYEPLRYQAEGAESTLSATLTFKKASNAALATSPV
ETSQDDAVQQPRFVPLRPCANVNGYSTVFLPGPSPSFILKSSKSVPRVIGLQGLGVRGMS
TFHTEGCDRGFIYADDEGIARVTQLPSETNFTDLGISVKKVPLDSDVCGIAYHQPTGTYI
AGCTINEPFELPRDDDYHKEWAKETLTFAPTMPRGVLKLISPISLTVIHDQELESCESIE
CMKTLQLEVSEETKERRFLLTVGTALSKGEDLPIRGRVHVFDIVTVIPEPGKPETNKRLK
AIAREDIPRGGVTAISEIGTQGLMLVAQGQKCMVRGLKEDGSLLPVAFLDMSCHVSSARE
LPRTGLCVMADAFKGVWFAGYTEEPYTFKILGKSHGRLPLLVADFLPDGEDLAIVAADAD
GDLHILEFNPEHPKSLQGHLLLHRTTFSVSPNPPTSMLLLPRTTPPAHPPPSDPSHILLL
ASPSGHLSTLVPLPETTYRRLLSVTNQLLPALTPYGGLNAKAYRLPSGTRPVGVEAAAGR
TVVDGAILARWAELGAAKRAEIAGKGGYDGVAELRDELEGVLGWSGLAYF
NT seq 4293 nt   +upstreamnt  +downstreamnt
atgcaggcctatacagagcttgcggctccttcagccgtcacacactccttgaccatcgcc
ctcacgtccgccacggcctcgaacctcgttgtcgcaaagggctccctgctccagatcttt
acaaccaaggccatctcggccgaattcgacgcccagaatcagcctgcgcagcctcccaag
gccgagcccgagtttgatcaccgcgcacatgacgacgatggcctcgaatcttcgttcctc
ggcggcggcgagtcaatgctggtccgcaccgatcgcacaaacaacaccaagttagtgctc
gtcgcagagctgccactcgctggaaccgttattggtcttgccaagatcaagaccaaacat
acaaaatccgggggcgaggctctcctgctagcatacaaagcggccaagatgtgcctatgc
gagtgggatcccaaaaagaacaccctcgagaccctctcaatccactactatgagaaggac
gagcttcagggcgctccctgggaggtcgcctttgacgaatacgtgaatttcctcgaggcc
gacccgggcagcagatgtgccgccttccagttcggctcgcgcaacatcgctatcctccca
ttccgacaagcggaagaggacttggagatggatgattgggatgaggatctcgacggaccg
cggcccgtcaaggagccaaccgcagtcgccaatggagatagcgacactctagaagcagcc
tatacaccgtcttttgtcctccgtctcccactgcttgatcccagtctgcttcatcccgtg
cacttggccttcctgcatgagtatagagagccgacttttggcatcctgtcgtccagccaa
gagcgggcgcactctcttggccagaaagatcacctcacatacaaggtctttacgctcgac
ctgcagcagcgcgcttcaaccaccattctctcagttaccgacctcccgcgagatctctac
aagatgattgctctgccagcgcctgttggcggcgcgttgctggtcggagagaacgagctc
attcatattgatcagtcgggcaaggccaatggcgtggctgtcaactcaatggctcgacag
attacctccttcagtttgtccgaccaggcggatttgaaccttcggttagagggttgcatt
attgaacagctgtacattgagaatggagaactactcttgattctcaatgacgggcgactc
ggcatagtgtcattccgaatcgacggccgcacagtatctggtatcagcgtcaagatgatt
ccagaggaaaacggtggcagtttaatcaagagccgcgcatcaacggcttcaaaactgggt
aaaaacaccttctttattggtagcgagactggcgactctgttgtgttgggttggtcgagg
aagatgagccaggaaaagcggcgcaagacacgtcttgttgacgccgaccttgggcttgat
gttgacgaactcgatcttgaggatgatgacgacgaagacgatgatctgtacggcactgaa
tccacagctgcaaagccagcccaggctctcaacggagcaggcaaatcgggtgaactgagc
ttccgcattcacgataccctactcagtatcgctcctatcagggacttgacatctggcaag
gcagctttcctgccagatagcgaagaggcgaccctgtcaaagggcgtcgtttctgaccta
caacttgcctgcgttgttggccgcggcaattctggatctctcgccatcctcaaccgacac
attcaacccaagattatcgggagattcgagtttccagaagcacgtgggttctggaccatg
tgtgtcaagaagcctgttcccaagtctctgggaggaaacgtcactgttgggaacgactat
gagacgttcgggcagcatgataagtacatgattgtggccaaggtcgacctcgacgggtat
gagacatcagatgtatatgctctcactgctgctggatttgaaactctgaaggagaccgag
tttgatcctgcggctggcttcactgttgaggctggaacgatgggcaagcaaatgagggtc
attcaggttctgaaatccgaagttcggtcctacgacggagaccttggtctcactcagatc
ctgccaatgcttgatgaggaaactggcgctgaacccagagttgtcagcgccagtatcgca
gacccctatctgctgcttattcgtgacgacagcagtgtcttgatcgcgcagatcgacagc
aacaacgagctcgaagaggttgaggagacggataacacactccaaagcacaaagtggcat
gcaggttgcttgtacacagatacaaaaggcgtcttccagccaagtgttggtgacaagggt
gcggacacttccaagattatgatgttccttcttagctcaacaggagccctacacgtctac
gcgcttcccgatctctcaaagccggtctacgtcgctgagggcttgtgttatgttcctcct
tacctctcggcagactatactctccgccgaggcctggctcgagagaatctccgcgagctg
ttggtggcagacctcggagatactgtatcccaatcaccatatctcatccttcgaaaccaa
accgacgatctcaccatttacgagccccttcgctaccaagcagagggtgctgaatctacg
ctatccgctacccttactttcaaaaaggcttccaatgcagcgctcgccacgagtcccgtc
gagacatcacaggacgatgccgtccaacaaccgcgtttcgtgcccctaagaccatgcgcc
aacgtcaacggctacagcaccgtcttccttccgggtccctcaccaagcttcatcctcaag
tccagcaagagtgtccctcgcgtcatcggtctccagggccttggtgttcgtggcatgagc
acattccataccgagggctgcgatcgaggtttcatctatgccgacgacgaaggtattgca
cgtgtcacgcagcttccctctgagaccaactttaccgaccttggcatatctgtcaagaag
gtacctttggatagtgatgtttgcggtatcgcgtaccatcaaccgactggcacatatatc
gccggatgcacaataaacgaaccgtttgagctaccaagggatgacgattaccacaaagaa
tgggccaaggaaacactcacttttgcaccaaccatgccccgtggtgttctcaagttaatc
agtcccatcagcttgacggtcatccacgatcaagagctcgagtcatgtgaatccatcgag
tgtatgaagacactgcagctcgaagtctcggaggagaccaaggaacgccgcttcctcctt
acagtgggaaccgccctctctaagggcgaggaccttcccatccgcggccgcgtccacgtc
tttgacattgtcaccgtcatccccgagcctggcaaacccgaaaccaacaaacgtctcaag
gccattgcccgcgaggacattccccgaggcggtgttactgccatctcggagattggtacg
cagggtctcatgctcgtcgcccaaggccagaagtgtatggtacgaggcctcaaggaggat
ggatcactgttgcctgtggctttccttgatatgagctgtcatgtttcgagcgctcgcgag
cttcccaggaccggcttgtgcgtcatggctgatgccttcaagggtgtctggttcgcagga
tacactgaggagccttacacattcaagatcctgggcaagagtcacggccggttgccgctc
ctggtagcagatttcctccctgatggcgaagatcttgccatcgttgcggcagatgctgat
ggcgatttgcacatcctcgagtttaaccccgagcatcccaaatcccttcagggacacctc
ctcctccaccgaacaaccttctccgtctctcccaacccgccaacctccatgctcctcctc
ccacgaacaacccccccagcccatcctcccccctcagacccttcccacatcctcctcctc
gcctccccatcaggtcacctctcaaccctcgtacccctcccagagacgacatatcgccgt
ctcctctccgtaacgaaccagcttctccccgcgctgacaccctacggaggtctcaacgca
aaggcataccgtctacccagtggtacgcgacccgtgggtgtcgaagctgctgcgggacga
accgtcgtcgacggtgctatcctggcgagatgggctgagctgggtgctgcaaagagggca
gagattgcaggcaagggtggctatgatggtgttgcggagctgagggacgagcttgagggt
gtgctgggatggagtgggctggcgtatttctaa

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