Fusarium falciforme: NCS54_00178700
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Entry
NCS54_00178700 CDS
T09198
Name
(RefSeq) Cft1-like protein
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
ffc
Fusarium falciforme
Pathway
ffc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCS54_00178700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_00178700
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00178700
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NCS54_00178700
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCS54_00178700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
MMS1_N
Motif
Other DBs
NCBI-GeneID:
77787736
NCBI-ProteinID:
XP_053003380
LinkDB
All DBs
Position
1:join(6197759..6199838,6199886..6200199,6200247..6200420,6200469..6201714,6201763..6202241)
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AA seq
1430 aa
AA seq
DB search
MQAYTELAAPSAVTHSLTIALTSATASNLVVAKGSLLQIFTTKAISAEFDAQNQPAQPPK
AEPEFDHRAHDDDGLESSFLGGGESMLVRTDRTNNTKLVLVAELPLAGTVIGLAKIKTKH
TKSGGEALLLAYKAAKMCLCEWDPKKNTLETLSIHYYEKDELQGAPWEVAFDEYVNFLEA
DPGSRCAAFQFGSRNIAILPFRQAEEDLEMDDWDEDLDGPRPVKEPTAVANGDSDTLEAA
YTPSFVLRLPLLDPSLLHPVHLAFLHEYREPTFGILSSSQERAHSLGQKDHLTYKVFTLD
LQQRASTTILSVTDLPRDLYKMIALPAPVGGALLVGENELIHIDQSGKANGVAVNSMARQ
ITSFSLSDQADLNLRLEGCIIEQLYIENGELLLILNDGRLGIVSFRIDGRTVSGISVKMI
PEENGGSLIKSRASTASKLGKNTFFIGSETGDSVVLGWSRKMSQEKRRKTRLVDADLGLD
VDELDLEDDDDEDDDLYGTESTAAKPAQALNGAGKSGELSFRIHDTLLSIAPIRDLTSGK
AAFLPDSEEATLSKGVVSDLQLACVVGRGNSGSLAILNRHIQPKIIGRFEFPEARGFWTM
CVKKPVPKSLGGNVTVGNDYETFGQHDKYMIVAKVDLDGYETSDVYALTAAGFETLKETE
FDPAAGFTVEAGTMGKQMRVIQVLKSEVRSYDGDLGLTQILPMLDEETGAEPRVVSASIA
DPYLLLIRDDSSVLIAQIDSNNELEEVEETDNTLQSTKWHAGCLYTDTKGVFQPSVGDKG
ADTSKIMMFLLSSTGALHVYALPDLSKPVYVAEGLCYVPPYLSADYTLRRGLARENLREL
LVADLGDTVSQSPYLILRNQTDDLTIYEPLRYQAEGAESTLSATLTFKKASNAALATSPV
ETSQDDAVQQPRFVPLRPCANVNGYSTVFLPGPSPSFILKSSKSVPRVIGLQGLGVRGMS
TFHTEGCDRGFIYADDEGIARVTQLPSETNFTDLGISVKKVPLDSDVCGIAYHQPTGTYI
AGCTINEPFELPRDDDYHKEWAKETLTFAPTMPRGVLKLISPISLTVIHDQELESCESIE
CMKTLQLEVSEETKERRFLLTVGTALSKGEDLPIRGRVHVFDIVTVIPEPGKPETNKRLK
AIAREDIPRGGVTAISEIGTQGLMLVAQGQKCMVRGLKEDGSLLPVAFLDMSCHVSSARE
LPRTGLCVMADAFKGVWFAGYTEEPYTFKILGKSHGRLPLLVADFLPDGEDLAIVAADAD
GDLHILEFNPEHPKSLQGHLLLHRTTFSVSPNPPTSMLLLPRTTPPAHPPPSDPSHILLL
ASPSGHLSTLVPLPETTYRRLLSVTNQLLPALTPYGGLNAKAYRLPSGTRPVGVEAAAGR
TVVDGAILARWAELGAAKRAEIAGKGGYDGVAELRDELEGVLGWSGLAYF
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctatacagagcttgcggctccttcagccgtcacacactccttgaccatcgcc
ctcacgtccgccacggcctcgaacctcgttgtcgcaaagggctccctgctccagatcttt
acaaccaaggccatctcggccgaattcgacgcccagaatcagcctgcgcagcctcccaag
gccgagcccgagtttgatcaccgcgcacatgacgacgatggcctcgaatcttcgttcctc
ggcggcggcgagtcaatgctggtccgcaccgatcgcacaaacaacaccaagttagtgctc
gtcgcagagctgccactcgctggaaccgttattggtcttgccaagatcaagaccaaacat
acaaaatccgggggcgaggctctcctgctagcatacaaagcggccaagatgtgcctatgc
gagtgggatcccaaaaagaacaccctcgagaccctctcaatccactactatgagaaggac
gagcttcagggcgctccctgggaggtcgcctttgacgaatacgtgaatttcctcgaggcc
gacccgggcagcagatgtgccgccttccagttcggctcgcgcaacatcgctatcctccca
ttccgacaagcggaagaggacttggagatggatgattgggatgaggatctcgacggaccg
cggcccgtcaaggagccaaccgcagtcgccaatggagatagcgacactctagaagcagcc
tatacaccgtcttttgtcctccgtctcccactgcttgatcccagtctgcttcatcccgtg
cacttggccttcctgcatgagtatagagagccgacttttggcatcctgtcgtccagccaa
gagcgggcgcactctcttggccagaaagatcacctcacatacaaggtctttacgctcgac
ctgcagcagcgcgcttcaaccaccattctctcagttaccgacctcccgcgagatctctac
aagatgattgctctgccagcgcctgttggcggcgcgttgctggtcggagagaacgagctc
attcatattgatcagtcgggcaaggccaatggcgtggctgtcaactcaatggctcgacag
attacctccttcagtttgtccgaccaggcggatttgaaccttcggttagagggttgcatt
attgaacagctgtacattgagaatggagaactactcttgattctcaatgacgggcgactc
ggcatagtgtcattccgaatcgacggccgcacagtatctggtatcagcgtcaagatgatt
ccagaggaaaacggtggcagtttaatcaagagccgcgcatcaacggcttcaaaactgggt
aaaaacaccttctttattggtagcgagactggcgactctgttgtgttgggttggtcgagg
aagatgagccaggaaaagcggcgcaagacacgtcttgttgacgccgaccttgggcttgat
gttgacgaactcgatcttgaggatgatgacgacgaagacgatgatctgtacggcactgaa
tccacagctgcaaagccagcccaggctctcaacggagcaggcaaatcgggtgaactgagc
ttccgcattcacgataccctactcagtatcgctcctatcagggacttgacatctggcaag
gcagctttcctgccagatagcgaagaggcgaccctgtcaaagggcgtcgtttctgaccta
caacttgcctgcgttgttggccgcggcaattctggatctctcgccatcctcaaccgacac
attcaacccaagattatcgggagattcgagtttccagaagcacgtgggttctggaccatg
tgtgtcaagaagcctgttcccaagtctctgggaggaaacgtcactgttgggaacgactat
gagacgttcgggcagcatgataagtacatgattgtggccaaggtcgacctcgacgggtat
gagacatcagatgtatatgctctcactgctgctggatttgaaactctgaaggagaccgag
tttgatcctgcggctggcttcactgttgaggctggaacgatgggcaagcaaatgagggtc
attcaggttctgaaatccgaagttcggtcctacgacggagaccttggtctcactcagatc
ctgccaatgcttgatgaggaaactggcgctgaacccagagttgtcagcgccagtatcgca
gacccctatctgctgcttattcgtgacgacagcagtgtcttgatcgcgcagatcgacagc
aacaacgagctcgaagaggttgaggagacggataacacactccaaagcacaaagtggcat
gcaggttgcttgtacacagatacaaaaggcgtcttccagccaagtgttggtgacaagggt
gcggacacttccaagattatgatgttccttcttagctcaacaggagccctacacgtctac
gcgcttcccgatctctcaaagccggtctacgtcgctgagggcttgtgttatgttcctcct
tacctctcggcagactatactctccgccgaggcctggctcgagagaatctccgcgagctg
ttggtggcagacctcggagatactgtatcccaatcaccatatctcatccttcgaaaccaa
accgacgatctcaccatttacgagccccttcgctaccaagcagagggtgctgaatctacg
ctatccgctacccttactttcaaaaaggcttccaatgcagcgctcgccacgagtcccgtc
gagacatcacaggacgatgccgtccaacaaccgcgtttcgtgcccctaagaccatgcgcc
aacgtcaacggctacagcaccgtcttccttccgggtccctcaccaagcttcatcctcaag
tccagcaagagtgtccctcgcgtcatcggtctccagggccttggtgttcgtggcatgagc
acattccataccgagggctgcgatcgaggtttcatctatgccgacgacgaaggtattgca
cgtgtcacgcagcttccctctgagaccaactttaccgaccttggcatatctgtcaagaag
gtacctttggatagtgatgtttgcggtatcgcgtaccatcaaccgactggcacatatatc
gccggatgcacaataaacgaaccgtttgagctaccaagggatgacgattaccacaaagaa
tgggccaaggaaacactcacttttgcaccaaccatgccccgtggtgttctcaagttaatc
agtcccatcagcttgacggtcatccacgatcaagagctcgagtcatgtgaatccatcgag
tgtatgaagacactgcagctcgaagtctcggaggagaccaaggaacgccgcttcctcctt
acagtgggaaccgccctctctaagggcgaggaccttcccatccgcggccgcgtccacgtc
tttgacattgtcaccgtcatccccgagcctggcaaacccgaaaccaacaaacgtctcaag
gccattgcccgcgaggacattccccgaggcggtgttactgccatctcggagattggtacg
cagggtctcatgctcgtcgcccaaggccagaagtgtatggtacgaggcctcaaggaggat
ggatcactgttgcctgtggctttccttgatatgagctgtcatgtttcgagcgctcgcgag
cttcccaggaccggcttgtgcgtcatggctgatgccttcaagggtgtctggttcgcagga
tacactgaggagccttacacattcaagatcctgggcaagagtcacggccggttgccgctc
ctggtagcagatttcctccctgatggcgaagatcttgccatcgttgcggcagatgctgat
ggcgatttgcacatcctcgagtttaaccccgagcatcccaaatcccttcagggacacctc
ctcctccaccgaacaaccttctccgtctctcccaacccgccaacctccatgctcctcctc
ccacgaacaacccccccagcccatcctcccccctcagacccttcccacatcctcctcctc
gcctccccatcaggtcacctctcaaccctcgtacccctcccagagacgacatatcgccgt
ctcctctccgtaacgaaccagcttctccccgcgctgacaccctacggaggtctcaacgca
aaggcataccgtctacccagtggtacgcgacccgtgggtgtcgaagctgctgcgggacga
accgtcgtcgacggtgctatcctggcgagatgggctgagctgggtgctgcaaagagggca
gagattgcaggcaagggtggctatgatggtgttgcggagctgagggacgagcttgagggt
gtgctgggatggagtgggctggcgtatttctaa
DBGET
integrated database retrieval system