Fusarium falciforme: NCS54_00179500
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Entry
NCS54_00179500 CDS
T09198
Name
(RefSeq) RRM domain-containing protein
KO
K12876
RNA-binding protein 8A
Organism
ffc
Fusarium falciforme
Pathway
ffc03013
Nucleocytoplasmic transport
ffc03015
mRNA surveillance pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00179500
09122 Translation
03013 Nucleocytoplasmic transport
NCS54_00179500
03015 mRNA surveillance pathway
NCS54_00179500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00179500
03041 Spliceosome [BR:
ffc03041
]
NCS54_00179500
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCS54_00179500
Spliceosome [BR:
ffc03041
]
Complex C
Other components
EJC/TREX
NCS54_00179500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
77787744
NCBI-ProteinID:
XP_053003388
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All DBs
Position
1:complement(join(6225372..6225590,6225650..6225892))
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AA seq
153 aa
AA seq
DB search
MADVEMDVDVDAASPPPPARNESDMQTHAKATAVRSIEGWIIVVTNVHEEADEESLQDIF
GEYGEIKNMHLNLDRRSGYVKGYALIEYTTLEEARAAIDGAHETKLLEQTIQVDFAFVRP
PPGKPGRGRGAGGRRTGRSRSRSPEGKEREERD
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtggaaatggatgtcgacgtcgacgcggcgtctcccccgccccccgcgcgc
aacgagtccgacatgcagacccatgccaaagccacagccgtccgctccatcgagggctgg
atcattgtcgtcaccaacgtccacgaggaggccgacgaggagtctctgcaggatattttt
ggagagtacggcgagatcaagaacatgcacttgaacctggatcgacgaagcggttacgtc
aagggatacgcgctgatcgagtacacgacccttgaggaggcccgcgcggccattgacggc
gcgcacgagacaaagctcctcgagcagaccatccaggtggactttgcattcgtccgaccc
ccgcctggtaagccaggacgcggacggggcgcgggcggtaggaggacaggccggagcagg
agtcgaagtcccgagggcaaggagcgcgaggaacgcgactga
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