Fusarium falciforme: NCS54_00230500
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Entry
NCS54_00230500 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ffc
Fusarium falciforme
Pathway
ffc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS54_00230500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00230500
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCS54_00230500
mRNA degradation factors
5'-3' decay
Decapping complex
NCS54_00230500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
77788254
NCBI-ProteinID:
XP_053003882
LinkDB
All DBs
Position
2:complement(join(1116466..1116754,1116804..1118917))
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AA seq
800 aa
AA seq
DB search
MSFFGFDATGRHNTAAPGFSQAHDPFAGLSGRDGDGDDALDFEDTYDGLGDQLEETGDAF
NDDTFGDSGPTVGKSVGKDFDFFGQTAKVAGAIEEEHLRFHRQGPAIKTTPAVPQYGAAD
MHSYYSNQPIQQPVRSGYEKYRDPEPLPDLHVDRSIWGIGPAKPAKQPSPAPPVQSIPSA
SSRKVMSLEEVEAAMRAQPKKPTPQPPVAELAYQQPPPGYPVQQQPPQQHGHGHPVTILQ
RPQSIQPKPTPPAQGLQATPVQQHQLPVQPTQILQNPNRSTPDARAAPHGHQAKHSHGAT
PSLAQLQAHPQMMQMSEEEKAAFLDQETKRAKRNHKIWLLSKDNGLMTPQDKNFITRIQL
QQLVAATGNPVDGSDASIAEDFYYQVYSHIRAGQRQNPSQPLSNFAQTYLYQTGSRQGGM
RRHGRPAENHFQRMEQQVQRAVEAAKNKPKNPQLVIAGSLGKISFSNAKTPKPLLNIKRT
ESDHQRPSSGKKGSSLDRKTILRNVEKVYQTLMQIEDHVRLIPPPMTSPDEELENKHKEW
ATILEAYNAKLWGELKVHEPIGVIVPHPFIAFLSCAKGEKAIPRIFPHLSFEQRTTILTM
IIYHLDQLDVVQGAAINPGEVTTLNARMREKIELFISTVMPSLMQYFNDTGLDIVDGVLN
LIATKLNVDLIARSRIGVSMLTLILSRAVLLKQTGAGTPEQWDKWDRTFETLFSRLEPSL
PHIFPGSVNTGEDVYVWQLLAAMGVSASHDQQTRLVLAVKDRVLDTVTVSKTLPPAMAAD
RLNSVNLFMRSIGLDVELLQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcttcggtttcgacgcaaccggccgccataacacggcggctcctggcttctcc
caagcccacgacccctttgcagggttgtcgggcagggatggagacggcgacgatgctctc
gactttgaggatacctatgatggtcttggagatcagcttgaggaaaccggcgatgcgttc
aatgacgatacttttggagatagtggccctacagtgggaaagagtgtgggcaaagatttc
gactttttcggccagacagccaaggttgccggtgctattgaggaagaacatctccgattc
catcgccagggacccgcgatcaagaccacccccgcagttcctcagtatggcgccgccgat
atgcactcgtactactccaaccagcccatccaacagcctgtacgctctggctatgaaaag
taccgagaccccgaaccgcttcccgatctccacgtcgacagaagtatctggggcattgga
ccagccaagcccgccaagcagccttctcccgctcctcctgttcaatctattccgtccgct
tctagtcgcaaggtcatgagtctggaggaggttgaggctgctatgcgagctcagcccaag
aaaccgacccctcagcctcctgtcgcggagctggcttatcaacagcctcctcctggatat
cctgttcagcagcaacctccccagcagcatggacatggccacccagtgactatcttgcaa
cggcctcagagcatccagccgaagcccacgccgccagcccaaggccttcaggcaactcct
gttcaacagcaccagctcccggtccaacctacccagatcctgcagaaccctaaccgctct
acccccgatgcgcgggcggcgcctcatggccaccaggccaagcactcccatggcgccacc
cccagtctcgctcagttgcaagcgcatcctcagatgatgcagatgtcggaggaagagaag
gcagcctttttggatcaagagacgaagagggccaagcgtaaccacaagatctggcttctc
tcaaaggacaatggcttgatgactccgcaagacaaaaacttcatcacccgcatccagctc
caacagctcgtcgccgccaccggcaacccagttgatggttcagatgcgtccattgcggag
gatttctactatcaggtttacagccacatccgagccggccagcgccagaaccccagccag
cctctcagcaactttgcccagacgtacctgtaccagactggcagccgccagggtggcatg
cgacgacatggccgacctgctgagaaccacttccagcgaatggaacagcaggtccagcga
gctgttgaggctgccaagaacaagcctaagaacccccagcttgtcatcgccggcagtcta
ggcaagatttccttcagcaacgcaaagacgcccaagcctctccttaacatcaagcgaacc
gagagcgaccaccagcgtccaagcagcggaaagaagggctccagccttgaccgaaagacg
attctgcgcaacgtggagaaggtgtaccagaccctgatgcagattgaggaccacgttcga
cttattccccctcccatgacgagccccgacgaggaactggagaacaagcacaaggaatgg
gctaccattctggaggcttacaacgccaagctttggggtgaactgaaggtccatgagccg
attggagtcatcgttcctcaccccttcattgctttcttgtcttgcgccaagggtgagaag
gccattccgcgaatcttccctcacctctcttttgagcaacgaactaccatcttgaccatg
atcatctaccatctcgatcagttggatgttgtgcaaggcgcagccatcaacccaggtgag
gtgactactcttaacgcgcgaatgcgagagaagattgaactgttcatctctactgtgatg
ccatcattgatgcagtacttcaatgatactggtttggatattgttgacggcgtcctcaac
ctcattgccacaaagctcaacgtggacctcatcgccagatcaagaatcggcgtgtccatg
ttgacacttattcttagccgtgccgtcctcctcaagcaaacgggcgccggcactccagag
caatgggataaatgggatcgcacttttgagaccttgttcagcagacttgagccttcgttg
cctcacatcttccccggtagtgtcaacaccggagaggacgtctatgtgtggcaacttctt
gcagccatgggcgtcagcgcgtctcacgaccaacagactcgccttgtcttggctgtcaag
gaccgcgtcctggacacggttactgtttcaaagacgctgcctccagctatggcggccgac
cggctgaacagcgtcaacctgtttatgcgttccatcgggttggatgttgagcttctccag
taa
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integrated database retrieval system
