Fusarium falciforme: NCS54_00414600
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Entry
NCS54_00414600 CDS
T09198
Name
(RefSeq) RRM domain-containing protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ffc
Fusarium falciforme
Pathway
ffc03013
Nucleocytoplasmic transport
ffc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NCS54_00414600
03015 mRNA surveillance pathway
NCS54_00414600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00414600
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCS54_00414600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_5
Motif
Other DBs
NCBI-GeneID:
77790095
NCBI-ProteinID:
XP_053005670
LinkDB
All DBs
Position
3:join(2750425..2750688,2750748..2750853,2750934..2751478)
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AA seq
304 aa
AA seq
DB search
MASRSPSRGRYRSRTRSPTPRSEYSRSPQRRPRHDSRSPARSPTPPRRNGRYRSRSRSRS
WSRGRDRDRGRDCSERGRSGSPLAKSTKIVVERLSKNINEQHLYEIFGQFGRIRDLDLPI
NRTFGTNRGTAYILFDYEADAEAAIAHMHEAQVDGATINVSIVLPRRKLSPAPPTARRGA
NIDPRVPFAGPRGGPPGMGAGGGGGGRRRMSPGSRFGPRSDVYRPGSRSPSRSSAGPPPS
RGGGSRYRSRSNNSYSSRSRSRSPAPRRRGGGGRHDEHDDRRRSDSRSSYGSHGDRSRSR
SRRR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcgttcgccgtcgcgtggccgctatcggtctcgcactcggtcgccaacaccc
cgatcagagtactcgcgttctccccagcgtcgtccccgtcatgactcgcgttctcctgcg
cgatcgccaaccccgccgcgccgcaatggtcgttacaggagccgcagccgtagccgcagc
tggagtcgtggtcgtgaccgtgaccgtggtcgtgactgcagtgaacgaggccggagtggc
tccccgctcgcaaagagtactaagattgtggtggagcgcctgtccaagaacatcaacgaa
cagcacctctacgagattttcgggcaattcggtcgcatcagggacctggatcttcccatt
aatcgcacttttggcaccaatcgtggaactgcatacatcctctttgactacgaggccgat
gctgaggccgccatcgcccacatgcatgaggcgcaggtggacggcgcgaccatcaacgtc
tctatagtgcttccccgccgcaagctctctccggctcctcccaccgccaggcgtggagcc
aacatcgatcccagagttcccttcgcagggccgcgtgggggtccccccggtatgggtgct
ggaggcggcggagggggtcgtcgtcgcatgtctccaggaagtcggtttgggcctaggtcg
gacgtataccgcccaggatcgcgctccccttcgagatcgtcagctgggccacctccttcg
cgaggtggtgggagccggtatcgcagtcggtccaacaactcttactcatccaggtcacgc
tctagatccccagctcctagacggcgagggggcggcggccgccatgacgagcacgacgac
agacgccgcagcgacagtcgtagcagctacggtagccacggtgatcggagtcgatctcgc
agccgccgcagatga
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