Fusarium falciforme: NCS54_00538200
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Entry
NCS54_00538200 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
ffc
Fusarium falciforme
Pathway
ffc03030
DNA replication
ffc03410
Base excision repair
ffc03420
Nucleotide excision repair
ffc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCS54_00538200
03410 Base excision repair
NCS54_00538200
03420 Nucleotide excision repair
NCS54_00538200
03430 Mismatch repair
NCS54_00538200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffc03032
]
NCS54_00538200
03036 Chromosome and associated proteins [BR:
ffc03036
]
NCS54_00538200
03400 DNA repair and recombination proteins [BR:
ffc03400
]
NCS54_00538200
DNA replication proteins [BR:
ffc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NCS54_00538200
DNA Replication Termination Factors
ELG1-RFC complex
NCS54_00538200
Chromosome and associated proteins [BR:
ffc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
NCS54_00538200
DNA repair and recombination proteins [BR:
ffc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NCS54_00538200
Check point factors
HRAD17(Rad24)-RFC complex
NCS54_00538200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_24
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
AAA_5
RuvB_N
AAA_3
DUF815
AAA_19
DEAD
AAA_14
MCM
AAA_28
Mg_chelatase
ResIII
HrpB4
AAA_18
SLFN-g3_helicase
AAA_7
IstB_IS21
TAFII28
bpMoxR
DNAX_ATPase_lid
ATPase_2
AAA_25
nSTAND3
RNA_helicase
TniB
Motif
Other DBs
NCBI-GeneID:
77791331
NCBI-ProteinID:
XP_053006864
LinkDB
All DBs
Position
4:complement(join(2040730..2041124,2041175..2041815,2041868..2042001))
Genome browser
AA seq
389 aa
AA seq
DB search
MSDFEDEMDVDVPAPSKDVVFSADTSKGKRSAANLPVEAEDSLPWVEKYRPNTLEDVSGH
HDILATINKFVDTNRLPHLLLYGPPGTGKTSTILALARRIYGAANMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFSLGGASARAGAGFKLIVLDEADAMTSTAQMALRRIMEKYTVN
TRFCIIANYAHKLSPALLSRCTRFRFSPLKEADIRVLVDKVVEEEHVKIGGEAVDALVKL
SKGDMRRALNVLQACHASSTPLRPKDAPKIPDSEIKRDNITTETIYNCIAAPPPDAIKEI
LSTLLNTSDVTSCLTTINSLKVSLGLALADIITALSEELTKLEVSPEVMITWLDGLADIE
HRVSGGSSEAIQTGAVVGVVRSGVELMSR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttgaggatgagatggacgttgatgtccctgccccttccaaggacgttgtc
ttttcagctgacacatcaaagggcaagcggagcgctgccaatctgcctgtagaggctgag
gatagcttgccttgggttgaaaagtaccgcccaaacactctcgaagatgtctcgggtcat
cacgacatcctggccacaatcaacaagtttgtcgacaccaaccgcctcccccacctcctc
ctctacggccctccaggcaccggcaagacatccaccatcctcgcccttgcgcgccgcatc
tatggcgccgcaaacatgcgccagatggtgcttgagctgaacgcatcggacgaccgtggt
atcgatgtagtgcgcgagcagatcaagacttttgccagtaccaagcagatcttctcgttg
gggggagcgtcagcccgcgcgggcgctgggttcaagctcatcgtgctagatgaggccgac
gccatgacgagtacggctcagatggccctgcgacgtatcatggaaaagtacactgtcaac
acccggttctgcatcattgccaactacgcccacaagctgagccctgctctgctgagtcgc
tgcacgcgcttccgcttcagccctctcaaggaggccgacatccgggtgctggtggacaag
gttgtggaggaggagcacgtcaagattggcggcgaggcggtggatgcgctggtgaagctg
agcaagggcgacatgcgacgggcattgaacgtgctacaagcttgccatgcgtcaagtacg
ccgttgcgaccaaaggatgctcccaagatccccgatagcgagattaagcgggacaacatc
acaacagaaacaatctacaactgcatcgcagcgccacctccagacgccatcaaggagatc
ctatcgacgctgctcaacacatcagacgtaacaagctgtctgaccaccatcaactctctc
aaggtgtcgctgggtctcgcgctggctgacatcatcaccgcgctgtctgaagagctgaca
aagcttgaagtaagcccagaggtgatgatcacctggctggatggcttggccgacatcgag
catagagtgtccggtggaagcagcgaggccatccagacgggtgctgttgttggtgttgtc
cgcagcggagtcgagctgatgagccgatga
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