Fusarium falciforme: NCS54_00542500
Help
Entry
NCS54_00542500 CDS
T09198
Name
(RefSeq) C3H1-type domain-containing protein
KO
K18716
nucleoporin NUP42
Organism
ffc
Fusarium falciforme
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00542500
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
NCS54_00542500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Nucleoporin_FG
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
77791374
NCBI-ProteinID:
XP_053006904
LinkDB
All DBs
Position
4:complement(join(2162372..2163862,2163916..2164109,2164160..2164255,2164342..2164387))
Genome browser
AA seq
608 aa
AA seq
DB search
MTVCRFFQQGNCKFGNNCRNEHPNPNNNRNQTSNRFGALGGGSNSVADKYSITVEAIERD
LTNETPQWILSAYAPGRDAPGQLFGGYPREQSFEELRLHYVMGKASGNEQQALNQAQELW
TNAQQQMQNAVRNAQEAVQFIVSAENNHPNRQDICKEGTQGAPFGEFIVGKRPKSMLDVF
TGQPHNQNSLATSNTSSPFGGGASAGQSAFGQPSALGAKPSPFGAPSFGQPSQPNTQGSA
FGQPSQLGQGGSAFGQPSQLGQGGSAFGQPSQPTTAFGQPSQPASAFGQASQPASAFGQT
SALGAKPSPFGAPSFGQPSQPNAQGSAFGQASQLGQKPNPFGSATNTNNNASPFGSAGNN
NNALAANPFGAPSGGFANNQNSSPFGNANNQQANSGFSSFGKPSQGASPFGQQQNAPAAS
SGFASANQAPAQNANNPFGQPSQPQPNGFASQNNQQANPFGQPSQPNPFGQPSAAPASAN
PFASAQPQAPKPAAVASSGNPYPPNSSKQHPPVESYSSKGMDGRLSMFRGKPVTYKDNLP
GIRDFDGTWRRIWFPDGPPGYSKDTELPPEQYDDKSKAQWMAFAQKGEFEDGVMPELPPP
RECTLWDF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgtgtagattctttcagcagggcaactgcaagtttggaaacaactgcaggaac
gaacaccctaaccccaacaataaccgaaatcaaacctcgaaccgtttcggagctctggga
ggaggaagcaacagcgtcgctgacaagtatagcatcacggtagaggccatcgagcgagac
ttgacaaacgagacgccgcaatggatcctgtcggcgtatgctcccggccgagacgccccc
gggcagctctttggagggtacccgcgcgagcagagctttgaagagctgcgccttcactac
gtgatgggcaaggcctcgggcaatgagcagcaagcattaaaccaagcccaggagctctgg
acgaatgcgcaacagcaaatgcaaaacgccgtccgaaacgcccaagaagccgtccaattc
atcgtcagcgccgagaacaaccacccgaaccgacaggatatctgcaaggaggggacacag
ggagccccttttggagaattcatcgtcggcaagcgaccaaagtcgatgctcgacgtgttt
accggtcaaccccataaccagaattcccttgcgacctcgaatacttcctcgcccttcgga
ggcggcgcttcagctgggcaaagtgcttttgggcaaccttcagccctcggcgcaaagccg
agtccttttggtgcgccgtctttcggccaaccgtcacagccgaatacccagggcagtgcc
tttggtcagccatcgcagcttggacaaggaggatcagcctttggtcaaccgtcgcagttg
gggcagggagggtcggcctttggacagccgtcacagccaactacggcatttggacagcct
tcgcaaccagcttcagcgtttggtcaggcgtcacagccagcttcggcttttggccagaca
tcagcccttggcgcgaaacccagcccctttggcgctccatcgttcgggcagccgtcgcag
ccgaatgctcaaggcagtgcctttggtcaggctagccagcttggccagaaaccgaatcct
tttgggtccgcgacgaatacgaacaataacgcgagtccctttgggtctgcgggcaacaac
aataatgctctcgcagcgaatccctttggtgcacccagcggcggatttgccaacaaccag
aactcgagcccatttggaaatgccaacaaccaacaggccaactctggattcagctcattc
gggaaaccttcacagggcgcttcgccctttggccagcaacagaatgctccggcagcatcg
agtggctttgcttctgctaatcaagcaccagcccagaatgcgaacaacccttttggtcag
ccgtcacaaccgcagcctaatggtttcgcatcacagaacaaccagcaagcgaatccattt
ggacagccatcgcaacccaatcccttcggccaaccctctgcagcacccgcaagcgcgaat
ccttttgcttcggctcagcctcaggccccgaagccagcagcggtggcgtcttctggtaac
ccgtaccctccaaacagcagcaaacaacacccgccggttgaaagctacagttccaagggc
atggatggccgactctcgatgttccgtggcaagccagtcacatataaggataacctgcca
ggtatccgagactttgatggaacatggcgacgaatctggttcccggatggcccgccggga
tattcaaaggatacggagcttccccctgagcagtacgacgataagtccaaggctcagtgg
atggcatttgcccaaaagggcgagtttgaggacggcgtgatgcctgagctgccgccgcca
agggaatgtacactgtgggacttctaa
DBGET
integrated database retrieval system
