Fusarium falciforme: NCS54_00543300
Help
Entry
NCS54_00543300 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ffc
Fusarium falciforme
Pathway
ffc04138
Autophagy - yeast
ffc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
NCS54_00543300
04148 Efferocytosis
NCS54_00543300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ffc04131
]
NCS54_00543300
Membrane trafficking [BR:
ffc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
NCS54_00543300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf-RING_5
TPR_PEP5_VPS11
BUD22
WD40_like
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
77791382
NCBI-ProteinID:
XP_053006912
LinkDB
All DBs
Position
4:join(2192200..2192715,2192762..2192788,2192838..2193823,2193872..2195621,2195672..2196475)
Genome browser
AA seq
1360 aa
AA seq
DB search
MTDQSPQPSHEQEHDPEAQQSKHDPARDEAQTPPLAKSIAPNDNANKTNTSEDKEQDSTV
EKKEDDANDIETGETRQLPAEDPKHGGLSKGSQEEEDNEDEDEEEDDDEDDQDQDEEDDD
DEEDDEDEDEDEDDEDEDDEPRLKYARLTQHLGGVYRNGDATSAFLVAGDKMIVGTHNGN
IHVVQLPIFQSLRVYHAHSASVTSISISPYPPPLPTEKPEGAPRHAAPSNASVSSRQTES
SPAAASRRPREAPQIPKIPSNDIFVATSSMDGNVCVQSLVDMRDVQLRNFARPVQAVALS
PEFKTDRTYLSGGLAGQLILTVGGGPGRSTSTTTGTAAATASGWLGSMGIGSNTGKDTIL
HSGEGTISTIKWSLSGKYVVWLNEHGIKIMRSKLHLESADTEDAWKRIGHIDRPQTDEWE
TMASVWKGRVEWIDEQAVELDESDQGSLDKALSPAAEKLKEQAVLGKRSIERLLVGWGGT
IWIIHVHPGGVGVGRHAGEKTLGRAEIVKILRMDCIISGISLYTQNLLLVLAYCLPDDDE
DEDQEAGSASPARKHKSNPSTGSEPSGGIRHRQNNQPPELRLIDLNSQAEADKDSLSVSR
YERLSSGDYHLGVLPARNAASAIASSRGAFEAIAGLGSDMWNAAINPRSLFSSGASIRSR
ESGEDVGSSLRAGSTTGTIRPGSRGGASPSVHSGLVKPGVKIFIHSPYDCILATRRDLSD
HLGWLLERQQYQRAWELLDEHPEIMAPITERTSDAVPSTPTRQQGAGDDFYDDESAVDSQ
YRDMYSSAEREKRRIGEMWIQELIEEDDWVSAGKICGKVLKTPDRWEKWVWTFAGAKKFD
AITNYIPTEPMHPRIPSTIYEVVLGHYIQNDKVRFRELLDRWAPELFDIKTITTALENQL
KYRDVREDSIDDGEKGRDWRIVMESLARLHEANGRQREALKCYIKLHDADSAFRLIRENH
LAEAVADDIPSFMGLRVPSGKLDQMTAEELEEATSEAVTLLVDEAQHGLLRPDIVVEQLL
SQNLNLYIYFYFRGLWRGEGIKEHTGENVDRLVMDSQSLVDNFADLAVHLFATFDRNLLM
QYLKTSVSYTFEKAVHECETFSYYDELVFLYSKTGQMKRALYLIIDRLKNVHKAIEFAKE
QDDPDLWEDLLKYSMDKPSFIRGLLEQVGTAINPITVVRRIPEGLEIEGLREGLTHMMKE
HEIQYSISSGVARVLRSEVAAAQNDLRAGQRKGIKFEVVVQESDHVDIEVKDVPTDPDNP
EETKAHPSTDHDHRVPKPGHCARCHEPFTEYEMETLVGYACGHVFHVSHLLEMLHGGKVD
IDLGNGAEEGSRYSVGMKVMKARLLKDKVRGGCPVCHVKA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccagtcgccgcaaccgagccacgagcaggagcacgatcctgaggcccaacaa
tcgaagcatgacccggcgcgcgatgaagctcagactcccccattagcgaagtcgatagct
cccaacgacaacgcgaacaagaccaacacctcagaagataaggagcaagactccacggtg
gagaagaaggaagatgacgcgaacgatatcgagactggggaaaccaggcaactgcccgct
gaggatcccaaacatgggggactaagcaagggtagtcaagaagaggaggacaacgaagat
gaagatgaggaagaagacgacgatgaagatgaccaagaccaagacgaagaagacgatgac
gatgaggaagacgacgaagatgaagacgaagatgaggacgacgaggacgaggacgatgag
ccgaggctcaagtacgcccggttgacccaacatcttggcggagtatatcgaaatggagat
gcgacgagcgcgtttctcgtcgctggggacaagatgatcgttggaacgcataatggcaac
atccacgtcgttcaactccccattttccagtcattaagggtctaccacgcccattcggca
tctgtgacttctatttcaatatctccatatccaccgccattaccgactgaaaagccggaa
ggggcaccacgacatgcggcacccagcaacgccagcgtctccagccgtcaaacagagtca
tctccggcggcagcgtccagaaggccccgcgaagcacctcaaatcccaaagattccctca
aatgacatctttgtcgccacgtcctccatggacggcaacgtgtgcgtacagtcccttgtc
gatatgagagatgtccaactacggaatttcgcccgaccagttcaagcggtggctttatcg
ccagagttcaaaacagaccgaacatatctctcaggaggactggctggccagctcattctt
actgtgggtggtggcccaggtcgaagtacctcgaccacgacggggactgcagcagccacg
gcctctgggtggttgggcagtatgggcattggcagcaacactggaaaggataccatcctg
cactctggcgaaggaacgatcagtacaatcaaatggtccttgtctggtaaatacgttgtc
tggttaaacgaacacggcatcaagatcatgcgctcaaagctccatctcgaaagcgcggac
acagaagacgcctggaaacggataggacacatcgaccgaccacagacagatgaatgggag
accatggccagtgtatggaaaggccgagtcgaatggatcgatgaacaagccgttgaacta
gacgagtcggatcagggctccctggacaaggccttgtcgccagcagccgaaaaacttaaa
gagcaagctgtcttgggcaagagaagcatcgagcggttgctcgtaggctggggtgggaca
atatggattatccacgttcatcctggtggtgttggcgtcgggcggcacgctggtgagaag
actctgggacgggcagagattgttaagatacttcgcatggattgcatcatttccggaatt
tctttatatacccaaaacctgttgctggttcttgcatactgtttaccagatgacgacgaa
gatgaagaccaagaggccggttcagcatcgccagccagaaagcacaagtcaaacccttca
acgggaagcgaaccttcaggcggcattcgtcatcgacagaataatcagcctcctgaattg
cgcctgatcgaccttaattcccaggccgaagctgacaaggatagcctcagtgtcagtcgc
tatgagaggctgtcatcaggcgactaccacctaggtgttttgcctgcgcgaaacgcagca
tcggcaattgcttcctcgagaggcgcctttgaggcgatagcaggacttggttcggacatg
tggaacgccgcaattaatccccggtcactcttcagttccggggccagcattcggagcagg
gagagcggcgaggacgtgggttctagtctcagggcgggaagcacaacaggcactatccgt
cctggctcaagaggtggtgcctcgccatcagtccactcaggactggtcaaaccgggtgtc
aagatattcatccacagtccatatgactgtattcttgctaccaggcgggacttgagtgac
cacctggggtggcttctggagcgtcaacagtaccagcgcgcttgggagcttctcgacgag
catcctgaaatcatggctccaatcactgaacggacgagcgatgctgttccctccacaccg
acgaggcaacaaggcgccggtgacgacttttatgacgatgagtccgccgttgattcgcag
tacagggacatgtactcgtcagccgagcgagaaaaacgacgaatcggggaaatgtggatt
caggagctcattgaggaagacgactgggtgtctgctggcaagatctgtggcaaggtgctg
aagacaccggacagatgggagaagtgggtttggacattcgctggcgccaaaaagttcgat
gccatcacgaactatataccgacggagccgatgcaccctcgaatcccttcgactatatac
gaagtcgtgcttggtcattacattcagaatgacaaggtgaggttcagggagttgctcgac
cgctgggcccctgagttgtttgacatcaagactatcacaacggcccttgagaatcagctc
aagtaccgggatgttcgtgaagacagcatcgacgatggagaaaagggacgagactggcgg
atcgtaatggaaagcctggcaaggctccatgaggccaatggacgccagcgggaagcactg
aagtgctacatcaagcttcacgacgccgattcagcattccgtctgattagagaaaatcac
cttgcagaggcagtcgcggacgacattcccagcttcatgggactccgagttccatcaggt
aaactggaccagatgacagccgaggagcttgaagaagccacatccgaagcagtcaccttg
ctagtagacgaggctcaacatggtctcctgcgcccagacattgtagtggaacagctactc
tcccagaacctcaacctgtacatatacttctacttccgaggtctatggagaggtgagggc
atcaaggagcacaccggagagaatgtcgaccgactggtcatggacagccagtccttggtg
gacaactttgctgacttggcggtccatcttttcgcgacatttgaccgcaatttgctgatg
cagtacctcaaaacctccgtctcgtatacatttgaaaaggctgtccatgaatgcgagacg
ttctcatactacgacgagctggtgtttctctactccaagaccgggcagatgaagcgtgcc
ttgtacctcatcattgaccgactcaagaacgtgcacaaggcgatcgagtttgccaaggaa
caagatgaccctgatctttgggaagaccttctcaagtatagtatggacaagcccagcttt
atccgtggccttttggaacaagttggtacagcaatcaaccctattaccgtggtacgacgg
attccggagggactggagatcgaagggctcagggagggccttacacatatgatgaaggag
cacgagatacaatacagcatcagctcgggtgttgcgcgtgtccttcgaagcgaggtggct
gcggcacagaatgatcttcgggccggacagcgcaagggcatcaagttcgaggtggtggtc
caggaaagtgatcacgtcgacatcgaggttaaggatgttcctacggacccggacaacccg
gaggagaccaaagcccatccttcgacggaccatgaccaccgggtgccgaagccggggcac
tgtgcgagatgccacgagccatttacagagtatgagatggagacattggttggatatgcg
tgtggacatgtgttccacgtgagccatctcttggagatgctacacggaggaaaggtagat
atcgatctaggaaacggcgctgaagagggaagtcgatattcggttggtatgaaggtgatg
aaggcgcggctgttgaaggacaaggtgcgaggaggttgccctgtttgtcatgtcaaagcg
taa
DBGET
integrated database retrieval system
