Fusarium falciforme: NCS54_00560600
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Entry
NCS54_00560600 CDS
T09198
Name
(RefSeq) Nsp1-C domain-containing protein
KO
K14306
nuclear pore complex protein Nup62
Organism
ffc
Fusarium falciforme
Pathway
ffc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NCS54_00560600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00560600
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
NCS54_00560600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
NPV_P10
PI_PP_I
BRE1
DUF7310
MRS2-like
Motif
Other DBs
NCBI-GeneID:
77791555
NCBI-ProteinID:
XP_053007078
LinkDB
All DBs
Position
4:join(2823469..2825445,2825503..2825691)
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AA seq
721 aa
AA seq
DB search
MSFSFGGTGGSSGAPNNNTTSTAPASGGLFGAAAGTPKFSFGGATAGSSTTPAGNPGGLF
GQQTGASAQKPAGGLFGGSATNNASTTPASTGTGLFGGGASTTPSSGGLFGGGGASTTPA
TTATTGGLFGGGATTSTTPASGGLFGNNGNAANKPAGNLFGGANTTTPASGGGLFGGQNN
ATQAQTAATTSAAPASGLFASTGNSLFGNKAASTAPTATPAKPTFALPSTTPAGAPPADS
SKPGGSNLFGNAGAQTSTTPSLFGAKPANTSAPAQPSTTTAASSGLFGGAQSGASAPSGG
LFGGGAPASTTAPSSGGLFGGAKTETAAPAASQAAGSTPSTTSTLFGAKPAAPAAATQSS
TPAGGLFGGAATTSVDATTSTPATAGGLFGAKPAATTAAAATTAAPATASSAGGLFGGAP
KPSTESTAPKPAGGLFGTPATTQAQTSATTAAPATAATTTAAPASSLFGAKAATTTDASK
DAAKPAAQNGTSALGASTTGPTSQMARLKNKTMEDIVTRWASDLSKYQKEFKEQATTVSS
WDRSLVDNGEKIQKLYLDTFEAERRSHEIERQLAAVENQQDELEAWLDRYESEVQDMFAK
QLGPGEQLAGPDQERERTYKLAEKLMQQLDEKSRDLTKMVKEINDISGTLNKGAKPEDPL
SQIVRVLNGHLTQLQWIDANASALQSKVTAAQKSSSNLGSHYGSSDNDAAESFYRSYMGR
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcagctttggaggcacaggcggctcttcgggcgcgccaaacaacaacacaacg
tccactgcgccggcttcgggcggtctctttggagctgcggcgggaacacctaagttctcc
tttgggggtgccactgccggtagcagcactacacccgcgggcaacccaggcggtttgttt
ggtcaacaaactggcgcctcggcgcaaaagcctgctggcggtctctttggaggctctgcg
actaacaacgcttctaccacaccggcatcgactggaaccgggctcttcggcggcggtgcc
tctacgactccctcatcgggcggcctttttggaggaggtggtgcttctaccactcctgcg
acaactgctacgacgggaggactgtttggtggaggtgccaccacttcaaccacgcctgcg
agcggagggctatttggaaacaacggaaacgctgccaacaagcctgcaggtaacctattt
ggtggtgctaacactactactcctgccagtggtggtggtctgtttggtggacagaacaat
gccacccaggcacaaaccgcagccaccacctcagctgccccggcatctggactgtttgcg
agcactggtaactctttgttcggaaacaaggcagcctccaccgcgccgactgcgaccccc
gcgaagccaacctttgctctgccatcgacgacaccagccggagcaccacctgcggactct
tcgaagcctggcggatccaaccttttcggaaacgcaggtgctcagacatccaccacaccc
tctctctttggagcgaagccggcgaacacctcggctcccgctcagcccagcacaaccaca
gcagcctcatccggtctctttggaggcgcgcagtctggcgccagcgccccttctggaggg
ctcttcggcggtggtgccccagcctctactaccgctccgtcatcaggtggacttttcggt
ggcgcaaagaccgagacagctgcaccagccgcttcccaagcagccggttcgacaccttct
actacctcaaccctgtttggtgctaagcccgcggctcctgcggcagctactcagagctcg
acacctgctggcggactctttggaggtgcggcaacaacatctgttgatgctaccacttcg
actcctgcgactgctggaggtttgttcggcgccaagcctgctgcaaccacagccgcagct
gcaactacggcggctccagcaacggcttcgagcgcgggtggtctctttggtggcgccccg
aagccttctaccgagtcgacggcgcccaagcctgcgggcggcttgtttggaacaccggcc
accacccaggctcagacatctgcaactacagctgctcctgcaactgcggcaacgacaacc
gcagcgccagcaagcagcctgttcggagccaaggcggccacgactacagacgccagcaag
gacgcagcgaagcctgccgctcagaacggaaccagtgctctaggtgcctccacgactgga
cctacctcacagatggcccggctcaagaacaagaccatggaggacattgtgacgcgatgg
gcctcggatctgtccaagtaccagaaggagttcaaggagcaggctaccactgtgtccagc
tgggacagaagcctcgtagacaacggcgagaagatccagaagttgtacctggatactttt
gaggcggagcgaagaagccatgagattgagcgacagcttgcggctgtggagaaccagcag
gatgagctcgaggcttggcttgatcgttatgagtcggaggtccaggacatgtttgccaag
cagcttggtcccggcgagcagttggcaggtcctgaccaggagcgggagcgcacatacaag
ctcgcagagaagctgatgcaacaattggatgagaagtcgagggacctcactaagatggtc
aaggagatcaatgacatttcaggcacacttaacaagggtgctaagcccgaggaccctctg
agccagatcgtccgggttctcaacggccacctcacacagctgcagtggatcgatgctaat
gcctcggccctccagtccaaggtgacggcggcccaaaagtcgagcagcaaccttggaagc
cactacggcagctcggataatgatgcggcggagagcttctaccgttcgtacatggggcga
cgataa
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