Fusarium falciforme: NCS54_00561500
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Entry
NCS54_00561500 CDS
T09198
Name
(RefSeq) RRM domain-containing protein
KO
K12881
THO complex subunit 4
Organism
ffc
Fusarium falciforme
Pathway
ffc03013
Nucleocytoplasmic transport
ffc03015
mRNA surveillance pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00561500
09122 Translation
03013 Nucleocytoplasmic transport
NCS54_00561500
03015 mRNA surveillance pathway
NCS54_00561500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00561500
03041 Spliceosome [BR:
ffc03041
]
NCS54_00561500
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCS54_00561500
TREX complex
NCS54_00561500
Spliceosome [BR:
ffc03041
]
Complex C
Other components
EJC/TREX
NCS54_00561500
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NCS54_00561500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_ACIN1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
77791564
NCBI-ProteinID:
XP_053007086
LinkDB
All DBs
Position
4:complement(join(2844111..2844601,2844657..2844804,2844860..2844926,2844980..2845028,2845081..2845213,2845259..2845348,2845416..2845499,2845588..2845635))
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AA seq
369 aa
AA seq
DB search
MADKMDRGLDEIIAETRSNRPRNQRGQGRRREPRQDYPRDGVRKVDLSSLSSSSDASSTS
TTLLATRPSVLGAFSIPPTYSPSETNRETSTGNSSHTSYPVQLLIGDSEWVHDRYEENNG
RRGPAPRRRRESPDQESRGSKLRVDNIHYDLTEDDLDELFRRIGPVVRLQLRYDRAGRSE
GTAYVTYEQKEDAQEAVRQFDGANANGQPIRLTLLPSGPARNPFDTAVMPSRPLAERISA
PGDRARSHSPHRRYDEDEAARKGIDRYVPGQGGDRRSPMPRRRGQGGRRPGARREGGGRE
GGRDQEGGRGGRGNPRTKKTQEELDAEMADYFGGGNAQTTEPSNGTEAAPAQAQAQAPAA
AVDDIDMIE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggaccgtggccttgacgagatcatcgccgaaactcgcagcaatcgg
cctcgcaaccaacgcggccagggtcgccggcgtgagccgcgccaggattaccctcgcgac
ggcgtcagaaaggttgatctatcctccctctcatcctccagtgatgcctcctcgacctct
acaaccctcctcgcaactcgtccttcggtgctcggagcttttagcatccctcccacatac
agtccttccgagacgaatcgcgaaacctcgacaggtaacagcagtcacacctcttatccc
gtccagttgctgattggagatagtgaatgggtccatgaccgatacgaagagaacaacggt
cgcagaggacccgctccacgccgacgccgcgagtctcctgaccaggagtccagaggctca
aaactgagagtcgacaacatccactatgacctcaccgaggatgacctcgatgagctcttc
cgcagaattggccctgttgttcgacttcaattgcgatatgaccgcgccggacgatctgag
ggaacagcctacgtgacctacgagcagaaagaagacgctcaagaggccgtccgacagttt
gatggcgccaatgccaacggacaacctattcgattgacacttcttcccagtggccctgca
agaaaccccttcgatacagctgtcatgcccagtcgccccttggcagagcgcatttcagcc
ccaggagacagggcacgatctcattcaccacaccgccggtacgacgaggacgaagcagct
cgcaagggaattgatagatatgttcctgggcaaggaggtgatcggaggagcccaatgccc
cggaggcgcggccagggtggtcgtcgtcccggagctcgtagagagggtggtggcagagaa
ggaggaagggatcaggagggaggccgtggtgggcgaggtaaccctcgcaccaagaagacg
caggaagaattggatgcggaaatggcggactactttggcggaggcaacgcgcaaaccacg
gagccatccaacggaaccgaggcagcccctgcccaggctcaggctcaagctccagccgct
gcagtcgacgatatcgacatgattgagtaa
DBGET
integrated database retrieval system
