KEGG   Fusarium falciforme: NCS54_00596600
Entry
NCS54_00596600    CDS       T09198                                 
Name
(RefSeq) Hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ffc  Fusarium falciforme
Pathway
ffc03020  RNA polymerase
ffc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ffc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCS54_00596600
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCS54_00596600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ffc03021]
    NCS54_00596600
   03400 DNA repair and recombination proteins [BR:ffc03400]
    NCS54_00596600
Transcription machinery [BR:ffc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NCS54_00596600
  RNA polymerase III system
   RNA polymerase III
     NCS54_00596600
  RNA polymerase I system
   RNA polymerase I
     NCS54_00596600
DNA repair and recombination proteins [BR:ffc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NCS54_00596600
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 77791915
NCBI-ProteinID: XP_053007419
LinkDB
Position
4:join(4079947..4079987,4080044..4080316,4080371..4080490,4080549..4080585)
AA seq 156 aa
MSDFGDDDVGGAGGDEPMYEDEEVTEYYDPEVVEEDEDGENRPQDGEDMDNVVVSGDPSA
AANALKGGEKLLKDKKIPEGERTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDP
LQIAIKEMREKKIPLIVRRYLPDGYYEDWTCEELLQ
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtctgactttggtgatgatgatgttggtggcgctggcggtgacgagcccatgtacgag
gacgaggaggttaccgagtactacgaccccgaggttgtcgaagaggatgaggatggtgag
aaccgacctcaggatggcgaggatatggacaacgtcgttgtttctggagacccctctgcc
gctgcgaacgcgctcaagggcggcgagaagctgctcaaagacaagaagatccccgagggc
gagcgaaccacgacgccttacatgaccaagtacgagagggcgcgcatcctcggaacccgc
gccctgcagatcagcatgaatgcgcccgtgcttgttgatctcgagggcgagacggacccc
ctgcagattgccatcaaggagatgcgggagaagaagatccccttgatcgtgcgacgatac
cttccggacggctactacgaggactggacttgcgaggaactgctgcagtga

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