Fusarium falciforme: NCS54_00650400
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Entry
NCS54_00650400 CDS
T09198
Name
(RefSeq) RNA helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ffc
Fusarium falciforme
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ffc03009
]
NCS54_00650400
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCS54_00650400
Ribosome biogenesis [BR:
ffc03009
]
Eukaryotic type
Pre-60S particles
Helicases
NCS54_00650400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTT_SPB4
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
77792453
NCBI-ProteinID:
XP_053007935
LinkDB
All DBs
Position
5:join(799062..799232,799288..800997)
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AA seq
626 aa
AA seq
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MAPGKEKRKSQRAWDALTPSLAEWILDAVATMGFSQMTPVQAATLPHFMGNKDVVVEAVT
GSGKTLAFLIPLVQKLLRLGEPTKKHHVAAIIVSPTRELAAQIHTVLLSLLQFHEASAEV
LPHLKGDEKRPATTSPAIVPQLLVGGTTTPAQDLSFFLRHSPNVLISSPGRLVELLSSPH
VHCPQSSFEVLVLDEADRLLDLGFKPDLQKILSHLPKQRRTGLFSASVSEAVGEIIRVGL
RNPVKIEVKVKMKDGGILEDRRTPASLQMTYMVKPASQKLPALAELLERLPVRPQRSIVF
LSTCAAVDYFQHILPSILPEGFALVPLHGKHPAKVREKNFNRFLTSVSPTILLTTDLAAR
GLDIPQVDLVVQIDAPSDPKVFIHRSGRAGRAGRKGLAVVMLHPGREEDYVKFLEIRKTP
IIELEKPEVITSEDGAVAITKKIRDLVQEDRALFDKAQKGFVSWARSYGAHQATSIFRAA
DLDWEDLGNAWGLLRMPRMPELKNWKGDKMLGLEIDWDNYAYKEKAREQARKVALEEEKS
GGKPDKKDENKRKRKNEAWSAKHEKEEERVERREKRHKRREAEKTAKMTDEDKVKQMELN
ELIAEVRRQNQAKAEKKDDEFEGFDD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctggaaaggagaagaggaagagccagagagcttgggatgctctcactccttct
ctcgcagaatggatcctcgatgctgtcgcgacaatgggcttcagccagatgacgcctgtc
caagctgcaactctcccccattttatgggaaacaaggacgttgtcgtcgaggctgtcacc
ggtagcggcaagaccctcgcattcctcatccctctcgtccaaaaactccttcgtctcgga
gagcccaccaagaaacaccacgtcgctgctatcatcgtctcacctacgcgcgaactggct
gcccagatccatacggtgttgctctcgctgctgcaattccacgaagcatccgccgaagtc
ctcccacacctcaagggcgatgagaagcgtcccgccactacgtccccggccattgtgccc
caattgctcgttggaggcaccacgacccctgcgcaggatctcagtttcttcctccgacac
agtccaaacgttctcatctcgtcacccggtcgactcgttgagctcctctcgtctcctcat
gtccactgtccccagtcctcgtttgaggtcctggtcctcgatgaagccgatcgccttctc
gacctgggtttcaagcccgatcttcaaaagattctatcacaccttccaaagcagcgaaga
actggcctctttagcgccagtgtcagcgaagctgttggcgagattatccgtgttggtcta
aggaatccagtcaagatcgaggtcaaggtcaagatgaaggatggtggcattcttgaggat
aggaggacacccgccagtcttcagatgacatacatggtcaagcccgccagccaaaaactt
ccagcccttgccgagcttctcgagcggttacccgttaggccacagagaagcatcgttttc
ctttctacttgcgcagccgtcgattacttccagcatatcctaccatcaattctgccagag
ggctttgctttggtacccctacacggcaagcaccctgccaaggttcgtgaaaagaacttc
aatcgtttcctcacttcggtatcgccaacaatattacttacaactgatctggccgctcgt
ggtctggatatcccccaagttgatctagtagttcagattgacgctccctcagaccccaag
gtctttatccatcgcagtggtagagcaggacgtgctggccgaaaggggttggctgtggtt
atgctacaccctgggcgagaagaagactatgtcaagttcctggaaattcgaaagacgcca
attattgagctagaaaagcccgaagtcattacatcagaggacggcgctgtggcgattacc
aagaagatccgcgatctggtccaagaagatagggcgctcttcgacaaggcccagaaaggt
ttcgtgagctgggctcgaagctacggtgcccaccaagctacgtctatcttccgagctgcc
gaccttgactgggaggaccttggaaatgcctggggcttgttgcgcatgcctaggatgccc
gaactcaagaactggaagggtgacaagatgctcggtctagagattgactgggacaactat
gcctacaaggagaaggcacgagaacaggccagaaaggttgccctcgaggaagaaaagtca
ggcgggaagccggataagaaggacgagaacaagcgcaagcgcaagaacgaggcctggagt
gcaaagcacgagaaagaggaggagcgtgtggagcgcagggagaagcggcacaagcggcgt
gaggctgagaagacggccaagatgacggacgaagacaaggtcaagcagatggaacttaac
gagctcattgctgaggttcgcagacagaatcaggccaaggcagagaagaaggacgacgag
tttgaaggattcgacgattag
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