Fusarium falciforme: NCS54_00667500
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Entry
NCS54_00667500 CDS
T09198
Name
(RefSeq) RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00667500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_00667500
03009 Ribosome biogenesis [BR:
ffc03009
]
NCS54_00667500
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCS54_00667500
Spliceosome [BR:
ffc03041
]
Complex A
U2 snRNP components
U2 related factors
NCS54_00667500
Complex B
NCS54_00667500
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NCS54_00667500
Ribosome biogenesis [BR:
ffc03009
]
Eukaryotic type
90S particles
Helicases
NCS54_00667500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA
Flavi_DEAD
NB-ARC
Motif
Other DBs
NCBI-GeneID:
77792624
NCBI-ProteinID:
XP_053008099
LinkDB
All DBs
Position
5:complement(join(1401491..1401607,1401695..1403884))
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AA seq
768 aa
AA seq
DB search
MSDAKGGKRLSADADESTRKKAKKDAADPDRSNPYLAHMYENGASNGHGEEPSPDSPLAG
MKRQQTTAKQASKAEDSESNPFTGRPHSQKYFQILQGRRDLPVHKQRQEFLDKYHSTQIL
VFVGETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVTLGEEV
GYSIRFEDMTGPKTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLK
QISMRRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIR
TVLQIHASEPEGDVLLFLTGEDEIEDACRKISLEADELMREVDAGPLAVYPLYGTLPPHQ
QQRIFDKAPAPLRKGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVES
LLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELK
KLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGGLASEFPLDPALAVML
ISSPEFYCSNEILSITSLLSVPQIFMRPANNRKRADEMKAHFAHPDGDHLTLLNAYHAFK
GQATSDPSSVKAWCHEHFLSFRHLSSADNVRTQLKRIMEKNELELVSTPFEDKNYYTNIR
RALLAGFFMQVAMKESSGKLYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYIRT
CVGIRPEWLLEIAPTYYDLDTFEQGDVKRSLARAAEKKRRKEAMKAGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccaagggaggaaagcgtctcagcgccgacgccgacgagtctactaggaaa
aaggcaaagaaggacgccgccgatcccgaccgcagcaacccctaccttgcgcacatgtac
gagaacggcgcgagcaacggccacggcgaggagccttcgcccgactctcctctcgccggc
atgaagaggcaacagacaacggcaaagcaggcttcaaaggctgaggactcagagtcaaac
cctttcactggccgacctcactcgcaaaagtacttccagatcctccagggccgtcgcgat
ctccctgtacacaagcagcgacaggagttcctggacaagtaccactctacacagatcctc
gtctttgttggtgagacgggttccggaaagactactcagatcccgcagtatgtcgtctat
gatgagctccctcacctcactggcaagctcattgcctgtacccagccgcgtcgagtcgcc
gccatgtcggtcgcgcagcgtgtcgccgatgagatggacgtcaccctgggagaagaggtc
ggttacagcattcgtttcgaggacatgacgggccccaagaccatgctcaagtacatgacc
gacggtatgcttctgcgcgaggccatgcacgaccacgagatgtcccgttacagctgcatc
atcctcgacgaagcccacgagcgtaccctggccaccgatatcctcatggctctgctcaag
cagatttccatgcgccgccccgatctcaagatcatcatcatgtctgctactctcgatgcg
caaaagttccagaagtacttcaacgacgcgcccctgctcgccgtccccggtcgaacccac
cccgtcgaaatcttctatacgcccgagcccgagcgcgactacgtcgaggccgccatccgc
accgttcttcagatccacgcttccgaacccgagggtgacgtcctgctgttcttgactggt
gaagatgaaattgaagacgcctgtcgcaagattagtctcgaggcggacgagctgatgcgc
gaagtcgacgccggcccgctcgctgtgtatcccctctacggtacgctgccccctcaccag
cagcagcgcatcttcgacaaggcgcccgcgcctctgcgcaagggcggtcgtcccggccgc
aaggtgatcgtttccaccaacatcgccgaaaccagtttgaccattgacggtattgtatac
gtcgtggaccctggctttagcaagcagaagatctacaacccccgtatccgtgttgagtcc
ctcctcgtctcacccatctccaaggcttccgcccagcagcgagctggtcgtgctggtcgt
accaagcccggaaagtgtttccgcctgtacacggaaaaggccttcaagaaggagctcatt
gagcagacgtaccctgagattctccgttccaacctcgccaacaccgtcctggaactcaag
aagcttggtgtcgaggatctcgtccacttcgatctcatggacccccctgctcccgagacc
atgatgcgtgcgctggaggagctcaactacctcgcctgtctcgacgacgacggtgagctc
acaaccctcggtggtctggcttccgagttccccctggatcccgccctggctgtcatgctc
atctcatcgcccgaattctactgctccaatgagatcctctccatcacatctctcctctca
gtcccccagatcttcatgcgacccgccaacaaccgaaagcgcgccgatgagatgaaggcg
cactttgcgcaccccgacggtgaccacctcactctccttaacgcttaccacgccttcaag
ggccaggcgacatcggaccccagcagcgtcaaggcctggtgccacgagcacttcctctcg
ttccgtcacctctcgagcgccgacaatgtgcggacgcagctcaagcgcatcatggagaag
aacgagctggagctcgtgtcgacgccattcgaggacaagaattactataccaacatccga
cgcgcgttgctggctggtttcttcatgcaggtggccatgaaggagagctcgggcaagctg
taccgcaccgtcaaggacgaccaggccgtcctgattcatccatccacggtcctccgcacc
gagtttgactgggtcctgtacaacgaattcgtgctcacgtcgaagcaatacatccgaaca
tgcgtggggatccgacccgagtggctattggaaatcgcccccacttactacgacctggac
acgtttgagcagggcgacgtcaagcggtctctggctcgtgctgcggagaagaagcggcgc
aaggaggccatgaaggctggcagatga
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