Fusarium falciforme: NCS54_00688300
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Entry
NCS54_00688300 CDS
T09198
Name
(RefSeq) Transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
ffc
Fusarium falciforme
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_00688300
03036 Chromosome and associated proteins [BR:
ffc03036
]
NCS54_00688300
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NCS54_00688300
Chromosome and associated proteins [BR:
ffc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
NCS54_00688300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
S1
SH2
HHH_3
Tex_YqgF
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
77792832
NCBI-ProteinID:
XP_053008300
LinkDB
All DBs
Position
5:join(2159080..2159247,2159309..2159497,2159562..2163177,2163238..2163491)
Genome browser
AA seq
1408 aa
AA seq
DB search
MSNSMRDLISGEAELDDEEDDESFDEDDGGDRRRRPAVEDSSEEEEDDDDEEEARKVREG
FIVDEDEDEDDVDEDDADVRPVVKRKREHRDREEEEQLDEDDLELIGEQFGERPKPQSQS
QYKRLKRGHRGEDRASERRGLEEIFSDDEDDAGEQRNYGRSYRGQVDEFEDFIEEDFPDD
PDVKAREMEDAEVARPRDRGVGHVIDTTNLDKDALDDMEAIFGNGEDYDWALQMEEEEED
REREEQAIELKDVFEPSQLKEKLLTDEDNEIRFTDEPERFQLDRKNFKNLQLTAEQFREE
ARWITNQLWPKKGLAPDLQSPFGKAVGKVLEFFIVDEVEVPYVFQHRKDYLLHTRKTRNP
NRDDPDAPEYVISAEKLLNQDDLWKILELDIKFRSFVDKRNSLEKTFENLRGLDINDSIV
EEMIPEATTMEELQDLQDYLHFQYGPQLKDLAAMAGNLSLTKRPGSKSNLLERVRQGKAY
NFVRAYGITADQLAKNALRQGKKVSPDDDAQYPMDLADSLIDDNFSTGDQVMNAARQMYA
EELFASPRMRKHFRNSYYQAAEISCRRTDKGLRRIDETHPYYEVKYLQNQAIADLVHQPE
LFLKMMKAEEEGLVSIKLDMPTRYDFRRQLYQEFESENFSDRAEQWREERKKVLDLAYPK
LEKIIAKNVKEVIRTFCQDEVLKMCREEYAKRLDQAPYKPKGMILGTTPRVLVLSNGMSD
PARDPVCWAWVEEDGRVIEQGKFGNLARDERQREDFVEVVNRRRPDVIGVSGWSADTNKL
VRDLETLVTEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHPSLNPV
TRYCVALARYMQNPMKEYAALGRDVTSLSYHPCQNLLPPEKLAKYLDSAMVDMVNLCGVD
INEAMTDSYTANLLPYVSGLGPRKASSVIKAINANGGAVNTRDELVGDPDSGKLPVVGPR
VWNNCASFLFIEYEATNPSSDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDENGP
GAIVRKLFKQDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFGL
LTASEIFTMFTGETKLTLCDGMIVPVNVRIVKDDFAIVKLDCGIEGRVEAHEASHRASIK
EVLSVGQTAQAKILDINYKDFMAKLSMREDSLRIPYKRPINFGRDGWDYALEAADKEELR
EKDKTTGRTQRVVKHPNFKPFNGIQAEEYLGSQPNGEVIIRPSSKGNDHLAVTWKVADGV
YQHIDVLEMQKETEFSVGKLLRVGGKYTYSDLDELIVEHVKAMVRKVEEMMRHDKFQSRS
RGETENWLTTYINANPNQSTYAFCIDTKHPGYFWLCFKASRTAKVIGLPVRTIPQGFELK
GYQYPDMRALCNGFKLRYQNEFSKMGRR
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagcatgcgcgatttaatctctggggaggccgagttggacgacgaggaggac
gacgagtcttttgacgaggatgatggtggcgaccgtagacggagacctgccgtcgaagac
tcgagcgaggaggaggaagacgatgacgatgaagaggaagctcgcaaggttcgcgaaggt
ttcatcgtcgacgaagatgaggacgaagacgacgttgacgaggatgacgctgatgtgcga
cccgtggtcaaaagaaagcgagagcatcgcgaccgcgaagaggaagagcaactggatgaa
gatgatctagagctgatcggcgaacaatttggcgagcgacctaagcctcagagtcagtcc
cagtacaaacgtcttaagcgcggccatcgtggtgaagatcgcgcatccgagcgtcgcggc
ctagaagaaatcttttccgacgacgaagatgacgcgggcgagcaacgaaactatggcagg
tcataccgaggacaggtcgacgagtttgaggacttcatcgaagaggacttccccgacgac
cctgatgtgaaagcacgggagatggaagatgctgaagtcgctcgacccagagatcgcggt
gttggtcatgtcatcgacaccaccaatctggacaaggacgcgttggacgacatggaggct
atcttcggcaatggtgaggactatgactgggcactccagatggaggaggaggaagaggac
cgtgaaagggaggagcaggccatcgaactcaaggatgtgtttgaaccgtcccagctgaag
gagaagctcctgaccgacgaggataacgagatccgtttcaccgacgagcctgaacgattc
caactcgaccgaaagaacttcaagaacctgcagctcaccgccgagcagttcagagaggag
gcacgatggattaccaaccagctgtggccaaagaagggcctagctcccgatctgcagagc
ccattcggcaaagctgttggcaaggtcctcgagttcttcattgtcgatgaggtggaagtg
ccctacgtcttccaacaccgcaaagactacctgcttcatactcgaaagacgcgcaacccc
aaccgcgacgatcccgatgcccctgaatatgtcatcagtgccgagaagctactgaaccaa
gatgatctctggaagattttggagttggatattaagttccgatcttttgtggacaagaga
aactcgctcgaaaagacctttgagaaccttcgaggtttggatatcaacgactcaattgtg
gaggagatgattcccgaggccacaaccatggaggaactccaggatctgcaggactacttg
catttccagtatgggccccagctcaaggaccttgccgccatggctggcaacctttccctt
acgaagcggccgggttccaagtcgaatctgctggagcgagtccgtcagggcaaggcgtac
aactttgttcgtgcctatggcattaccgcggaccagctcgccaagaatgctttgcgacag
ggaaagaaggtgtctcctgacgatgacgctcaatatcctatggacttggccgacagcttg
attgatgataacttcagcacaggcgatcaggtcatgaacgcggcacgacagatgtatgca
gaggagctgtttgccagtccgagaatgcgcaagcatttccgaaactcgtactaccaggct
gctgagatcagctgtcgacgaaccgacaagggactgcgcaggatcgacgagacccatcct
tattatgaggtgaagtacctgcagaaccaggccatcgccgaccttgttcatcagcctgag
ctcttcctcaagatgatgaaggccgaggaggaaggactggtcagcatcaagcttgatatg
cccaccagatacgacttccgcaggcagctctatcaggagttcgagtcggagaacttcagc
gatcgagcggaacaatggcgggaagaacgcaagaaggtcctcgatctcgcataccccaaa
ctggagaagatcattgccaagaacgtcaaggaagtcatccgaacgttctgtcaggatgag
gtgctcaagatgtgccgagaagagtacgccaagcgactcgaccaggcgccttacaagccc
aagggcatgattttgggtaccactcctcgtgtgctggttctctccaatggtatgagcgac
cctgctcgcgatcccgtctgctgggcttgggtcgaggaagatggacgagtgattgagcaa
ggaaagtttggcaatcttgctcgagacgagcgccagcgagaggactttgttgaagttgtc
aaccgccgtcgacccgatgtgattggtgtcagcggttggtctgccgataccaacaagctc
gtgcgtgacctagagactctggttaccgagaagggcctcatgggcccagagtttgaggac
ccagacacaaacgactaccgcacagagcctttggaggttgtggtggtgaacgacgaggtg
gcccgcctgtacaaggacagcccccgagcgcttgccgagcacccaagcctcaaccccgtc
acaaggtactgtgttgctctggcacgctacatgcagaaccccatgaaggagtacgcggcc
ctcggtagggatgttacctctctctcttaccacccgtgccagaacctcctccccccagag
aagttggccaagtacctcgactcggcgatggtcgacatggtcaacctgtgtggtgtggac
attaatgaagccatgaccgacagttacactgccaacctcttgccgtatgtctcgggcctg
ggaccacgaaaagcctcgagcgtgataaaggcgatcaatgccaacggcggcgctgttaat
accagagatgagctcgttggcgatcccgatagcggcaagttgccagtcgtgggccccagg
gtgtggaacaactgcgcgagtttcctcttcatcgaatacgaggccactaacccgtcttct
gatcccttggataacacgcgtgtgcaccctgaagactacgaacttggccgcaagatggcg
gccgacgctctggagcttgacgaggaagacgtcaaggctgagacagacgagaacggcccg
ggtgcaatcgtgcggaagctctttaagcaagatgaacaggacaaagtcaatgaacttgtt
ctggaggagtatgcagagcagctcgagaggaactacagccaacgcaagcgagccactctg
gagacgattcgtgccgaactccaggctccttacgaggagctgcgaaggaactttggcctt
ttgacggcctcggagatctttaccatgttcactggcgaaaccaagctgactctctgcgac
ggcatgattgtgcccgtcaacgtacgaattgtcaaggatgactttgccattgtcaagctt
gattgtggtatcgagggcagagtcgaggctcatgaagctagccaccgcgcgtccatcaag
gaggtgctcagcgttggacagacggcgcaggccaagatcctggacatcaactacaaggat
ttcatggccaagttgtcaatgcgggaagactcgctgcggattccgtacaagcgaccaatc
aactttggacgtgatgggtgggattacgcccttgaagcggcggacaaggaggagctgcgg
gagaaggacaagaccacgggccgaacgcagcgtgtggtcaagcatcccaacttcaagcca
ttcaacggtatccaggccgaggagtacctcggatcgcaacccaacggtgaggtgattatc
cgtccctcatccaagggtaacgatcatctggcggtcacgtggaaggttgcagatggcgtt
taccagcacatcgacgtgctggagatgcagaaggagacggagttttcggtgggcaagctg
ctgcgcgttggcggcaagtacacgtacagtgatctggacgagctgatcgtggagcacgtc
aaggccatggtgcgcaaggtggaggagatgatgcggcacgacaagttccagagccgatct
cggggagagacggagaactggctaacgacatacatcaacgccaacccgaaccagtcaacg
tatgcattctgcatcgacaccaagcaccctgggtacttctggctgtgcttcaaggccagc
cggacggccaaggtgatagggctgccggtgcgaacgatcccgcagggctttgagctcaag
ggttaccagtacccggacatgcgagcactgtgcaacggtttcaagctgcgataccagaac
gagttttccaagatgggacgtcggtag
DBGET
integrated database retrieval system
