Fusarium falciforme: NCS54_00690800 Help Entry NCS54_00690800    CDS       T09198                                  Name (RefSeq) Regulator-nonsense transcripts 1   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism ffc  Fusarium falciforme Pathway ffc03013   Nucleocytoplasmic transport ffc03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ffc00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     NCS54_00690800    03015 mRNA surveillance pathway     NCS54_00690800  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ffc03019]     NCS54_00690800 Enzymes [BR:ffc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      NCS54_00690800     5.6.2.5  RNA 5'-3' helicase      NCS54_00690800 Messenger RNA biogenesis [BR:ffc03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      NCS54_00690800    mRNA cycle factors     Common to processing body (P body) and stress granule      NCS54_00690800 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase NPHP3_N PIF1 Viral_helicase1 NAT10_TcmA_helicase ATPase SLFN-g3_helicase nSTAND3 SRP54 AAA_25 AAA_22 PhoH TraI_hel_assoc_N AAA_10 Ribosomal_S13_N Motif Other DBs NCBI-GeneID:  77792857 NCBI-ProteinID:  XP_053008324 LinkDB All DBs Position 5:join(2249700..2249986,2250041..2253005) Genome browser AA seq 1083 aa AA seqDB search MEGAFTHVGNHLISDSAAAIKAGADDLSAIDPDESLLYGKYGDRSGRRRADDDDNQTEAF EEDDNDSLNSVPIDGLTGLKLKGPEEEKELPAHACAYCGIHSPGCVVKCLTCNKWFCSAR GNGTSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFLLGFIPAKSDTVVVLL CRQPCAANTSNKDMNWDTSRWQPLIEERAFLPWLVATPSDSEQLRARHLTPNMIAKLEEM WKIEPKATVVDLEKASSIDDDPNPVLLQYDDPYHYQNIFGPLVKMESDYDKKLKEAQSED GLIVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSPWEGVGYVIKIPNN QSDEVTLELRKTGNEKSVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFH TLLGHEVQLQPLKTSLPKKWSAPGLPDLNPSQVNAIKTVLQKPLSLIQGPPGTGKTVTSA TIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHE QVRMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKVAERDILNNADVVCCTCVGAGDP RLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS LFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYEGTLQNGVTHENRLRKDVDFPWPVAE MPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGVITPYEGQRSYI VTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVAL TRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPKVSYRQK NQQPQFGAGSYPNGRFNPPPAAGRDFDLGSMVSYIPDDVSSVHGSAFGGASLNSAFPPMF SSFTPDQWPGLPGVAAPGRGGKARSRATESIAGESVANSEFTDATSSVIGGKGVGQGGVS LGAGLHDVVTGMRPVSYSQSDRLKQYVESSGRMVPGNGYGRRFDDDEKSISTAFHSQIGG GYD NT seq 3252 nt NT seq  +upstreamnt  +downstreamnt atggagggcgcgtttacccatgttgggaatcatttgatatccgattccgctgccgccatc aaggctggagccgacgacctgtccgcgatcgaccccgacgagagcttgctctatggcaaa tatggagatcgaagtggccgtcgccgagccgatgatgacgacaaccaaaccgaggctttc gaagaagacgacaacgatagtctgaatagtgttccgatcgatggcttgactggactcaag ctcaagggccccgaggaggagaaggagcttccggcccatgcctgcgcatactgcggaatt cattccccaggatgcgtcgttaagtgcctcacctgcaacaagtggttctgcagtgccaga ggcaatggtacttccacccacattgtgaaccatcttgttcgagctcgccacaaggaggtt cagctacaccccgagtcgaccctgggcgataccgtgctggagtgctacaactgcgggaca aagaacgcgttcctcctgggtttcattccggccaagtctgatacggtcgtcgttttgctc tgccgacagccatgtgctgccaacacatcgaacaaggacatgaactgggatacctcgcga tggcaacccctcatcgaagaacgcgctttcctgccctggctggtggcgaccccttctgat tccgagcagctccgagctcgccatttgacgccgaacatgattgccaagctggaagagatg tggaagatcgagcccaaggcgacggtggttgaccttgaaaaggcgtctagcatcgatgac gatcctaaccccgtcctgctgcaatacgacgatccctatcactaccagaatatcttcggc cccctggtcaagatggagtccgactacgacaagaagctcaaggaggcgcagtccgaggat ggcctcatcgttcgctgggactatggtctgaacaacaagcaccttgtcagcttcaacctg cacaagattgagtctggcgatgttaagcttgccgttggtgatgagatgcgacttcgctac aagggcgagctccgatccccctgggaaggtgttggctacgtgattaagatccccaacaac cagtcggacgaggtgacgctcgagttgcgcaagaccggaaacgagaagtcggttcctact gatctatctcacaacttctcggctgattacgtctggaaggccacttcttacgaccgtatg cagctagctatgaagacgttcgccgtcgatgacatgagcgtttctggctacatcttccac accttgctgggccacgaagttcagttgcagcctctcaagacaagcctgcctaagaagtgg tctgcccctggcctccctgatctcaaccctagccaggtcaatgccatcaagactgttctc cagaagccactgagtctgattcagggtccccctggaactggcaagacggtcacttctgcc accatcatctaccacctcgccaagatgagcggcaaccaggttctggtttgtgcgccatct aacgttgctgttgaccagctgtgcgagcgagttcaccgtaccggactcaaggttgttcgt cttactgccaagtctcgcgaggatgtcgaatcgtctgtcagcttcctcgccctgcacgag caagtgcgcatgtcggagcacaacagtgagctcgtcaagctctcgcagctgaagaacgag ttgggcgaactgtcgagccaggatgagaagaagtacaagcagctcaccaaggtcgcagag cgtgacatccttaacaacgctgatgttgtctgctgcacctgcgtgggtgctggtgaccct cgtctttctaagatgaagttccgcaatgtcctgatcgacgagtcaacccagtcggccgag cccgaatgcatgattccccttgtcctcggttgcaagcaagttgttctggtcggtgaccac aagcaacttggcccagtcatcatgaacaagaaggcagccaaggctggacttaaccagtct ctctttgagcgattggttaacctgaagctctcgcccatccgactcaacattcagtaccga atgcacccttgcctgtccgagttcccgtccaacatgttctacgaaggtactctgcaaaac ggtgttacccacgagaaccggctgcgaaaggatgtggacttcccttggcccgttgcggaa atgcccatgatgttctggtccaacctgggccatgaggaaatctcggcttctggaacatcg tacctcaaccgcacggaagcatccaatgttgagaaggcagtcaccagattcttcaaggcc ggcgtaaagcccgctgatatcggtgttattactccgtacgagggccaacgaagctacatt gtgactaccatgcagaactcaggtacttacaagaaggaatattacaaagaagttgaggtg gcttcagtcgacgctttccagggtcgtgagaaggactttatcgttctctcttgtgttcga tccaacgacaaccagggcattggtttcttgtctgacccccgtcgtctgaacgtggccttg acccgagccaagtatggccttgttatcctcggaaaccccaaggtcctgtccaagcacgag ctctggcacaacctcctggttcacttcaaggatcgcaagtgtttcgttgaaggtcccctg accaacctccaggcctgcttgctgcagttcagccgccccaaggtgagctaccgccagaag aaccagcagccgcagttcggagctggcagctatcctaacggacggttcaacccaccaccc gccgcgggccgagatttcgacctgggctctatggtgtcgtacatccctgacgatgtctcg tctgttcacggttctgcgtttggcggcgcttcactcaacagcgcgttccctcctatgttc tcgagctttactcccgatcaatggcccggcctgcccggtgtcgcagctcctggccgtggt ggaaaggcccgcagccgtgctacggaaagcattgcaggcgagagcgtggccaactcggaa ttcacggatgcaacttcgagcgtgatcggcggcaagggtgttggccaaggcggtgttagc ctcggagcagggctccacgatgtcgtgacgggaatgcggcctgtttcatacagccagagc gatcgactgaagcagtacgtcgagagcagtggacgtatggttccaggtaacggttatgga cgacgtttcgacgacgacgagaagagcatcagcacggcattccacagccagattggcggt ggctacgactga

DBGET integrated database retrieval system